BAC Information

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BAC

Clone NameB6Ng01-300H09
Chromosome6 (Build37)
Map Location 79,444,346 - 79,444,868
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps6_789.1, LOC384440
Downstream geneLOC621815, LOC100043392, Lrrtm4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300H09.bB6Ng01-300H09.g
ACCGA095032GA095033
length9901,185
definitionB6Ng01-300H09.b B6Ng01-300H09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaattcaggtgtctaagaatgtgtctactagaattttttttt
agtcaagttccactacatagaactgtcaaacacagaattctctgtgtagg
tgagactgaccttaggctagcaaagaacctgctatctgtttcctatatgc
caaggttagatttctaccacagttggcaaagaattcgtttaaatacagta
atgattttctgtttttaattttgaatttatcatctttccccttttcatct
ctgttcaacataagttttgaagtcccagtcaaagaaattaagagaaaaaa
aaaaaaaaacaaaaagcattccattaaaatttgaaagaaagcagttaaat
cacacctatttatagatagtgttatttcatatataaacattgcaaagact
ctaccaaaatgtggtagaacaaatcaataaaataaagccagaaacaagga
acaaaacttgagtccaaacaccattggccaaagtataaattgctaggtaa
attctaagagcaagctagccaaaatagaaataagaatataatttcacagc
agtcaaaaacaaaatcacttacactcatatagcttagagagagagagaga
gagagagagagagagagagagagagagagagagaaattctacaattaaaa
aagttggtgaagacatgaataaatggaaaagcagccagtatttgtctgtt
ggactaattaacaattttgacatgttcacaacatacaaagaaaatttaac
aagtactacaatctttagtaatgtcaatggcatgcgtcacagaaatttaa
agttctaggtttggagcttgtgagatggtttagcaattaagagcactggt
tgttcttccagagaagccagattcagtactcagttccacatggcagatca
cagctgtctctaactccaattctaggggatcttacaccctcatacagaca
cacatgcaggcaaaacacccacacatgcccccaaacacaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagataaaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctagtgatggatcacagggctcccaa
tggaggagctagagaaattacccaagagctaaagggatcttcaccgtaat
aggtggacacatatgactaccagtaccctgagctcttgactctagctgca
tatgtattcaaaagatggctagtcgcattcactgaaagagaggtcccatg
aacccgcagactttgtgtgcccggttacagaacgcagtcaaggggaatgg
cttgctagccatcgctctctgcagtgaagaagcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_79444346_79444868
seq2: B6Ng01-300H09.b_45_567 (reverse)

seq1  TTTGGCTAGCTTGCTCTTAGAATTTACCTAGCAATTTATACTTTGGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTAGCTTGCTCTTAGAATTTACCTAGCAATTTATACTTTGGCCAA  50

seq1  TGGTGTTTGGACTCAAGTTTTGTTCCTTGTTTCTGGCTTTATTTTATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTGGACTCAAGTTTTGTTCCTTGTTTCTGGCTTTATTTTATTGA  100

seq1  TTTGTTCTACCACATTTTGGTAGAGTCTTTGCAATGTTTATATATGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTACCACATTTTGGTAGAGTCTTTGCAATGTTTATATATGAAAT  150

seq1  AACACTATCTATAAATAGGTGTGATTTAACTGCTTTCTTTCAAATTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTATCTATAAATAGGTGTGATTTAACTGCTTTCTTTCAAATTTTAA  200

seq1  TGGAATGCTTTTTGTTTTTTTTTTTTTTTCTCTTAATTTCTTTGACTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGCTTTTTGTTTTTTTTTTTTTTTCTCTTAATTTCTTTGACTGGG  250

seq1  ACTTCAAAACTTATGTTGAACAGAGATGAAAAGGGGAAAGATGATAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAACTTATGTTGAACAGAGATGAAAAGGGGAAAGATGATAAATT  300

seq1  CAAAATTAAAAACAGAAAATCATTACTGTATTTAAACGAATTCTTTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTAAAAACAGAAAATCATTACTGTATTTAAACGAATTCTTTGCCA  350

seq1  ACTGTGGTAGAAATCTAACCTTGGCATATAGGAAACAGATAGCAGGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGTAGAAATCTAACCTTGGCATATAGGAAACAGATAGCAGGTTCT  400

seq1  TTGCTAGCCTAAGGTCAGTCTCACCTACACAGAGAATTCTGTGTTTGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGCCTAAGGTCAGTCTCACCTACACAGAGAATTCTGTGTTTGACA  450

seq1  GTTCTATGTAGTGGAACTTGACTAAAAAAAAATTCTAGTAGACACATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATGTAGTGGAACTTGACTAAAAAAAAATTCTAGTAGACACATTCT  500

seq1  TAGACACCTGAATTGTTGAATTC  523
      |||||||||||||||||||||||
seq2  TAGACACCTGAATTGTTGAATTC  523