BAC Information

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BAC

Clone NameB6Ng01-303M16
Chromosome6 (Build37)
Map Location 11,247,356 - 11,248,226
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040285, LOC667650, AA545190
Downstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303M16.bB6Ng01-303M16.g
ACCGA097506GA097507
length1,1261,176
definitionB6Ng01-303M16.b B6Ng01-303M16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgtacctcattttttaaagggttatttggttc
tctgaagtctatcttcatgagttctttgtatatattggatattagccatc
tattggatacaggattgataaagatcttttcccaatctgttggttgccat
tttgtcctatagtgtctctaggccttacagaaacttttcaattttatggg
gtaccatttgttgattgttgatcttagagcgtgagccactgttcttctag
tccagaaatttccgcctgtgcccatgtgttccaggctcttccccactttc
tcttctattagatttggtgaatctggttttatgtggaggtcctttatcca
gttggaccttagctttgtgcaaaggggataaaaatgcattgatttacatt
cttgtacatgctgactgcacttaaaccagcatgattttttgtaaatgctg
tcttttttctactggattgttttagcttctttgtcaaagatcaagtgact
ataggtgtgtgggtttctgggtcttcaattctgttctattgatctacatg
cctgtccctgaaaaataccatgcagtttttatcattatttctctgtcata
cagcttgaagtaagggatggtgatttttcccccagaagttcttttatcgt
tgagaataattttcactatcgtggaattgattattccaaatgaatttgca
aatttcaattttaattacttttcttttcttttcttttcttttatttcatt
ttattttttacaatccagtctttactcacctcactgtcctggatgcatct
ctctagattccatagtcattttcctcataatgtccagtgatgctagaaca
actggctctcaggaaggaggtctatcataaggtaaatcctgtatccaaca
gtgcccagtatcataacgaggatattccactcttctctcaaataaatatc
attttacccccttcattatttctctttttgggaaaaaaattaggatgggc
tgctaagattcatgggttacacctttttctacactgtctacagtagcaga
ggggagaggagaaggagggaaggtaagatgaatcagtaccccaacttatt
tcaagttccaaggacaggcttatcaa

gaattctttgtttagctctgtcccccatttttgaataaggttatttgatt
ctctggtgtcaacttcttgagttatatattggatattagccctctatcag
atgtagaattggtaaagatctttctgcaatctgttggctgccattttgtc
ctattgtcagtgtcctttgccttacagaagctttgtaattttatgaggtc
ccatttgtcagttgttgatctcagagtataaacaattggtgttctgctca
ggaactttccccctgtgtctatgtgtctgagagtgttctccactttctct
tctattagtttcagtggatctggctttatgtggaggtcctcgatctactt
gaaattgagctttgtacaaggagataagaatggaaattagtgtggtggtt
cctcagaaaattggacatagtattatctgaggacccagcaataccactcc
tgagcatatacccaaaagatgctctaacaaataacaaggacacatgctcc
actatgttcacagcaaccttatttataatagccagaagctggaaagaacc
caaatgtccttcaacagagaaatggatgaagaaaaggtttacacaataga
gtactacttaactattagaaacaatgacttcatgaaattcttaggcaaac
agatagaactagaaaatatcatcctgagtgaggtaacctaatcacaaaag
aacacatggtatacattcactgatttcactgataagtgggtattagccca
taagctgggattacccaagatacaattcacagatcacatgtagctcacga
agaaggaaggccaaagtgtgggtgctttggtccttcttagaaaggggaac
aaaatactcatgggagcaaatatggagacaaagtatggagcagagactga
agcaaaggccatccaaagactatcccacctgggggatccatcccatatac
aatcacgaacccagacactattggtggggtgcaaagaagtacgtgctgac
agtagcatgttatagctgtcacctggagaggcactgcagagctgacaaat
acaggaggcgcatgccttgagcagttcattggacttagtggagcacaggt
cccaatgggagttccattggaggagttagaacaggtactggatgaacgtt
gaagagagggttacacacctcatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11247356_11248226
seq2: B6Ng01-303M16.b_308_1175

seq1  TTTCCGCCTGTGCCCATGTGTTCCAGGCTCTTCCCCACTTTCTCTTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGCCTGTGCCCATGTGTTCCAGGCTCTTCCCCACTTTCTCTTCTAT  50

seq1  TAGATTTGGTGAATCTGGTTTTATGTGGAGGTCCTTTATCCAGTTGGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGGTGAATCTGGTTTTATGTGGAGGTCCTTTATCCAGTTGGACC  100

seq1  TTAGCTTTGTGCAAAGGGGATAAAAATGCATTGATTTACATTCTTGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTGTGCAAAGGGGATAAAAATGCATTGATTTACATTCTTGTACA  150

seq1  TGCTGACTGCACTTAAACCAGCATGATTTTTTGTAAATGCTGTCTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACTGCACTTAAACCAGCATGATTTTTTGTAAATGCTGTCTTTTTT  200

seq1  CTACTGGATTGTTTTAGCTTCTTTGTCAAAGATCAAGTGACTATAGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGATTGTTTTAGCTTCTTTGTCAAAGATCAAGTGACTATAGGTGT  250

seq1  GTGGGTTTCTGGGTCTTCAATTCTGTTCTATTGATCTACATGCCTGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTTCTGGGTCTTCAATTCTGTTCTATTGATCTACATGCCTGTCCC  300

seq1  TGAAAAATACCATGCAGTTTTTATCATTATTTCTCTGTCATACAGCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATACCATGCAGTTTTTATCATTATTTCTCTGTCATACAGCTTGA  350

seq1  AGTAAGGGATGGTGATTTTTCCCCCAGAAGTTCTTTTATCGTTGAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGGATGGTGATTTTTCCCCCAGAAGTTCTTTTATCGTTGAGAATA  400

seq1  ATTTTCACTATCGTGGAATTGATTATTCCAAATGAATTTGCAAATTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACTATCGTGGAATTGATTATTCCAAATGAATTTGCAAATTTCAA  450

seq1  TTTTAATTACTTTTCTTTTCTTTTCTTTTCTTTTATTTCATTTTATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTACTTTTCTTTTCTTTTCTTTTCTTTTATTTCATTTTATTTTT  500

seq1  TACAATCCAGTCTTTACTCACCTCACTGTCCTGGATGCATCTCTCTAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCCAGTCTTTACTCACCTCACTGTCCTGGATGCATCTCTCTAGAT  550

seq1  TCCATAGTCATTTTCCTCATAATGTCCAGTGATGCTAGAACAACTGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGTCATTTTCCTCATAATGTCCAGTGATGCTAGAACAACTGGCTC  600

seq1  TCAGGAAGGAGGTCTATCATAAGGTAAATCCTGTATCCAACAGTGCCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGGAGGTCTATCATAAGGTAAATCCTGTATCCAACAGTGCCCAG  650

seq1  TATCATAACGAGGATATTCCACTCTTCTCTCAAATAAATAATCATTTTAC  700
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATCATAACGAGGATATTCCACTCTTCTCTCAAATAAAT-ATCATTTTAC  699

seq1  CCCCTTCATTATTTCTCTTTTT-GGAAAAAAATTAGGATGGGCTGCTAAA  749
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  CCCCTTCATTATTTCTCTTTTTGGGAAAAAAATTAGGATGGGCTGCT-AA  748

seq1  GATTCATGGTTTACACC-TTTTCTACCACTGTCCTACAAGTAGCAGAGGG  798
      ||||||||| ||||||| ||||||| |||||| |||| ||||||||||||
seq2  GATTCATGGGTTACACCTTTTTCTA-CACTGT-CTAC-AGTAGCAGAGGG  795

seq1  GAAGAAGAGAAGGAAGGAAAGTAAAGAATGAATCAGTACCCC-ACT--AT  845
      | ||| |||||||| |||| ||||   ||||||||||||||| |||   |
seq2  G-AGAGGAGAAGGAGGGAAGGTAA--GATGAATCAGTACCCCAACTTATT  842

seq1  TCAAGTTTCCCAGGACA-GCTTATCAA  871
      ||||| |||| |||||| |||||||||
seq2  TCAAG-TTCCAAGGACAGGCTTATCAA  868


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