BAC Information

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BAC

Clone NameB6Ng01-305J15
Chromosome6 (Build37)
Map Location 65,414,281 - 65,415,202
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid2, Atoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik
Downstream gene9030611K07Rik, A930038C07Rik, LOC667160, Prdm5, 4930544G11Rik, Ppia-ps6_651.1, LOC100041916
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305J15.bB6Ng01-305J15.g
ACCGA098853GA098854
length9261,193
definitionB6Ng01-305J15.b B6Ng01-305J15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatgttggatggagagttgggtgacagatacactgtcatttt
ctactgctatctagtaaaccataccattcttgaaaacaaaaatgggtgtt
tattcatctgtttccccaaggagacttctatttgattcgctgtcaggata
acttcaaggccaggactgagtcatctgacatccgctatacaattgcccaa
atggatggttatttggccagcaaagcttttacataccctctgaatgtgtt
aacgtgacttccatgtagactagtggctatatttcgggagggggtgcaaa
aaagtaaaagtgatgccattttcaaaatttgttcctccatgaccaatcat
gtctgattaggtcagaggcctcctccatgggagagaatacatgcctggtc
agagttttataggtgggaggttgggggcctagggaggaatttactaattc
tcatccttgctgtgtcaaaaataaacacagagtatcttgggaacctccag
ggattcatggggaaaacacatcattcctaaagtgagtctttaaatattac
ttctgctcattgtcattggcgatttcctgggtataagttaatgatagatt
ataaacattaagaattttcattattattgaatcaatttatttttacttct
gtatcaaatgttgacaatatccatgttttataaacatattttaaagttat
aattattagcatacatttattatgttaagtatatccacaatttattctaa
tcagtcatctattgggagaacacttcagttgagtccaagtctaaactact
gctaacgtatccttcaatatttgtgtgctatcattcatttgagcacaagt
tctcaatttttcttatataactatccaagaatggggttgctcagtcatag
ggaaaaattgcagatttagatttttc
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcgatagtcacaaataaaataaaatatctcggag
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaagcc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaatccacacagctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggttgctg
gcacaactggttgttatcatgtagaagatgcgaatcgatccatacttatc
tccttgtactaagtcaaatctaaatggatcaaagaacttcacataaaaca
gaagacactgaaccttatagaagagaaagtggggaaaagcctttgaggat
ttggcacaggtaaaatcctggacagaacacgcaatggcctgtgttagatc
gagaaattgactatgagactaagtaaactttctcaaaggttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_65414281_65415202
seq2: B6Ng01-305J15.b_46_971 (reverse)

seq1  GAAAAATCTAAATCTGCAATTTT--CCTATGACTGAGCAACCCCATTCTT  48
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  GAAAAATCTAAATCTGCAATTTTTCCCTATGACTGAGCAACCCCATTCTT  50

seq1  GGATAGTTATATAAGAAAAATTGAGAACTTGTGCTCAAATGAATGATAGC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTTATATAAGAAAAATTGAGAACTTGTGCTCAAATGAATGATAGC  100

seq1  ACACAAATATTGAAGGATACGTTAGCAGTAGTTTAGACTTGGACTCAACT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATATTGAAGGATACGTTAGCAGTAGTTTAGACTTGGACTCAACT  150

seq1  GAAGTGTTCT-CCAATAGATGACTGATTAG-ATAATTTGTGGATATACTT  196
      |||||||||| ||||||||||||||||||| |||| ||||||||||||||
seq2  GAAGTGTTCTCCCAATAGATGACTGATTAGAATAAATTGTGGATATACTT  200

seq1  AACATAATAAATGTATGCTAATAATTATAACTTTAAAATATGTTTATAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATAAATGTATGCTAATAATTATAACTTTAAAATATGTTTATAAA  250

seq1  ACATGGATATTGTCAACATTTGATACAGAAGTAAAAATAAATTGATTCAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGATATTGTCAACATTTGATACAGAAGTAAAAATAAATTGATTCAA  300

seq1  TAATAATGAAAATTCTTAATGTTTATAATCTATCATTAACTTATACCCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGAAAATTCTTAATGTTTATAATCTATCATTAACTTATACCCAG  350

seq1  GAAATCGCCAATGACAATGAGCAGAAGTAATATTTAAAGACTCACTTTAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCGCCAATGACAATGAGCAGAAGTAATATTTAAAGACTCACTTTAG  400

seq1  GAATGATGTGTTTTCCCCATGAATCCCTGGAGGTTCCCAAGATACTCTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGTGTTTTCCCCATGAATCCCTGGAGGTTCCCAAGATACTCTGT  450

seq1  GTTTATTTTTGACACAGCAAGGATGAGAATTAGTAAATTCCTCCCTAGGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTTGACACAGCAAGGATGAGAATTAGTAAATTCCTCCCTAGGC  500

seq1  CCCCAACCTCCCACCTATAAAACTCTGACCAGGCATGTATTCTCTCCCAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACCTCCCACCTATAAAACTCTGACCAGGCATGTATTCTCTCCCAT  550

seq1  GGAGGAGGCCTCTGACCTAATCAGACATGATTGGTCATGGAGGAACAAAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGCCTCTGACCTAATCAGACATGATTGGTCATGGAGGAACAAAT  600

seq1  TTTGAAAATGGCATCACTTTTACTTTTTTGCACCCCCTCCCGAAATATAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAATGGCATCACTTTTACTTTTTTGCACCCCCTCCCGAAATATAG  650

seq1  CCACTAGTCTACATGGAAGTCACGTTAACACATTCAGAGGGTATGTAAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAGTCTACATGGAAGTCACGTTAACACATTCAGAGGGTATGTAAAA  700

seq1  GCTTTGCTGGCCAAATAACCATCCATTTGGGCAATTGTATAGCGGATGTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTGGCCAAATAACCATCCATTTGGGCAATTGTATAGCGGATGTC  750

seq1  AGATGACTCAGTCCTGGCCTTGAAGTTATCCTGACAGCGAATCAAATAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACTCAGTCCTGGCCTTGAAGTTATCCTGACAGCGAATCAAATAGA  800

seq1  AGTCTCCTTGGGGAAACAGATGAATAAACACCCATTTTTGTTTTCAAGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTTGGGGAAACAGATGAATAAACACCCATTTTTGTTTTCAAGAA  850

seq1  TGGTATGGTTTACTAGATAGCAGTAGAAAATGACAGTGTATCTGTCACCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGGTTTACTAGATAGCAGTAGAAAATGACAGTGTATCTGTCACCC  900

seq1  AACTCTCCATCCAACATGGTGAATTC  922
      ||||||||||||||||||||||||||
seq2  AACTCTCCATCCAACATGGTGAATTC  926