BAC Information

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BAC

Clone NameB6Ng01-310L22
Chromosome6 (Build37)
Map Location 75,999,598 - 76,000,723
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145
Downstream geneEG546907, LOC100042952, LOC668153, EG668155, LOC100042956, Ctnna2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310L22.bB6Ng01-310L22.g
ACCGA102639GA102640
length1,1171,184
definitionB6Ng01-310L22.b B6Ng01-310L22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaggaaagattactatataattgagataaatgaccttgatga
gctaatggtcacttcatgcagttattaatctttccaatttttgttaaata
atatctcattcagtttgttggtcttgattcttccatacacataatatgac
agaattaattcagcagcagctttgactgatatgtagtggtttcattatat
accccttctaactctcggtaatttcagatgtttttctgtgcagttctgat
tgttgatagattggaatctctatggtgatgatatcagcaatacattttta
gagtcataagagttattcagtaagggtggctttctcatgaataaaatgga
tttaaagaggaatagcaaagacatccaaactattcaaggcagtgaaaagg
aagctaagaaaatagacagggctctgcaagcagtcacagtttccgtaaga
aaaatttgaaaacctctgcaattctatcatcagcctgtagtggacagagg
ctcatgaatatttatggttttagagagtagaaaaatatacaagggcacca
gcatgtctagccctgggctgagataaagtaaaagatagctttaatttgtg
acaaagaagcaaagtcaaattaacactttccccttaacccacacttcatt
cataattaaatgcccttggaaccttagaagaggttatcaagttctatagg
attctgatgaggttacatgcaactccttgagggctgggttctaacctcac
aacctgaaaacaccaggtttctaatatcctcttttttgaactggctaaca
ctattcacatcagccatatcttaattaaaggtatgcactgccctgcagaa
taagaaagggaatgctggctttccatttattatctctgtatttgagaggg
aaaaacatctcacaacatataagcatctaagcttaaaaggccatttcatt
acattatatgattgagtacatttcaactttgttgtcaagtttgttttgtt
tgtttttgtttgttgttgttgttttgggtaaaatataaatgaagatggat
gtgagttgtatgaatgcctactgttacatgcaaaaggcctcagttagtaa
gtaatatctcaagcaag
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatatctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaggagctaaagggatctgcaacccta
taggtggacacattatgagctaccagtaccccggagctctgactctagct
gcataatatatcaaaggatgacttagtcgcatcactgcaaaggagagccc
atgaactgcaaacctttaatgccagtacaggcataccaggcctaaaatgg
tatggctggctaagagagagaaatgtgtgcgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75999598_76000723
seq2: B6Ng01-310L22.b_43_1159

seq1  GAATTCTCCAGGAAAGATTACTATATAATTGAGATAAATGACCTTGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGGAAAGATTACTATATAATTGAGATAAATGACCTTGATGA  50

seq1  GCTAATGGTCACTTCATGCAGTTATTAATCTTTCCAATTTTTGTTAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGGTCACTTCATGCAGTTATTAATCTTTCCAATTTTTGTTAAATA  100

seq1  ATATCTCATTCAGTTTGTTGGTCTTGATTCTTCCATACACATAATATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCATTCAGTTTGTTGGTCTTGATTCTTCCATACACATAATATGAC  150

seq1  AGAATTAATTCAGCAGCAGCTTTGACTGATATGTAGTGGTTTCATTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAATTCAGCAGCAGCTTTGACTGATATGTAGTGGTTTCATTATAT  200

seq1  ACCCCTTCTAACTCTCGGTAATTTCAGATGTTTTTCTGTGCAGTTCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCTAACTCTCGGTAATTTCAGATGTTTTTCTGTGCAGTTCTGAT  250

seq1  TGTTGATAGATTGGAATCTCTATGGTGATGATATCAGCAATACATTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATAGATTGGAATCTCTATGGTGATGATATCAGCAATACATTTTTA  300

seq1  GAGTCATAAGAGTTATTCAGTAAGGGTGGCTTTCTCATGAATAAAATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATAAGAGTTATTCAGTAAGGGTGGCTTTCTCATGAATAAAATGGA  350

seq1  TTTAAAGAGGAATAGCAAAGACATCCAAACTATTCAAGGCAGTGAAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAGGAATAGCAAAGACATCCAAACTATTCAAGGCAGTGAAAAGG  400

seq1  AAGCTAAGAAAATAGACAGGGCTCTGCAAGCAGTCACAGTTTCCGTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAGAAAATAGACAGGGCTCTGCAAGCAGTCACAGTTTCCGTAAGA  450

seq1  AAAATTTGAAAACCTCTGCAATTCTATCATCAGCCTGTAGTGGACAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGAAAACCTCTGCAATTCTATCATCAGCCTGTAGTGGACAGAGG  500

seq1  CTCATGAATATTTATGGTTTTAGAGAGTAGAAAAATATACAAGGGCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAATATTTATGGTTTTAGAGAGTAGAAAAATATACAAGGGCACCA  550

seq1  GCATGTCTAGCCCTGGGCTGAGATAAAGTAAAAGATAGCTTTAATTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCTAGCCCTGGGCTGAGATAAAGTAAAAGATAGCTTTAATTTGTG  600

seq1  ACAAAGAAGCAAAGTCAAATTAACACTTTCCCCTTAACCCACACTTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAGCAAAGTCAAATTAACACTTTCCCCTTAACCCACACTTCATT  650

seq1  CATAATTAAATGCCCTTGGAACCTTAGAAGAGGTTATCAAGTTCTATAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAAATGCCCTTGGAACCTTAGAAGAGGTTATCAAGTTCTATAGG  700

seq1  ATTCTGATGAGGTTACATGCAACTCCTTGAGGGCTGGGTTCTAACCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATGAGGTTACATGCAACTCCTTGAGGGCTGGGTTCTAACCTCAC  750

seq1  AACCTGAAAACACCAGGTTTCTAATATCCTCTTTTTTGAACTGGCTAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAAAACACCAGGTTTCTAATATCCTCTTTTTTGAACTGGCTAACA  800

seq1  CTATTCACATCAGCCATATCTTAATTAAAGGTATGCACTGCCCTGCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCACATCAGCCATATCTTAATTAAAGGTATGCACTGCCCTGCAGAA  850

seq1  TAAGAAAGGGAATGCTGGCTTTCCATTTATTATCTCTGTATTTGAGAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGGGAATGCTGGCTTTCCATTTATTATCTCTGTATTTGAGAGGG  900

seq1  AAAAACATCTCACAACATATAAGCATCTAAGCTT-AAAGGCCATTTCATT  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAAACATCTCACAACATATAAGCATCTAAGCTTAAAAGGCCATTTCATT  950

seq1  ACATTATATGATTGAGTACATTTCAACTTTGTTGTCAAGTTTTGTTTTTG  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||  
seq2  ACATTATATGATTGAGTACATTTCAACTTTGTTGTCAAG-TTTGTTTT--  997

seq1  TTTTGTTTTTGTTTGTTTGTTTGTTTGTTTTGGGTAAAATATAAATGAGA  1049
       |||||||||||||| |||||   |||||||||||||||||||||||| |
seq2  GTTTGTTTTTGTTTG-TTGTT--GTTGTTTTGGGTAAAATATAAATGA-A  1043

seq1  GAATGAATGTGAGTGTTATGGAATG-CTACTGTTATCATGCAAAAAGGCT  1098
      | ||| ||||||||  ||| ||||| ||||||||| ||||||||| | ||
seq2  G-ATGGATGTGAGTTGTAT-GAATGCCTACTGTTA-CATGCAAAAGGCCT  1090

seq1  CAGTTAGTAAATTAATATCTCAAACAAG  1126
      |||||||| || ||||||||||| ||||
seq2  CAGTTAGT-AAGTAATATCTCAAGCAAG  1117