BAC Information

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BAC

Clone NameB6Ng01-315F03
Chromosome6 (Build37)
Map Location 146,033,481 - 146,033,932
singlet/doubletsinglet
Overlap genenone
Upstream geneLrmp, Casc1, Lyrm5, Kras, LOC100039495, LOC100042866, LOC546917, 1700073E17Rik, Ifltd1, LOC100042879, Tuba3b, Rassf8, Bhlhb3, Sspn
Downstream geneItpr2, 4933424B01Rik, Fgfr1op2, Tm7sf3, Surb7, EG626175, Stk38l, LOC621842, Arntl2, 1700023A16Rik, Ppfibp1, 1700034J05Rik, 2210417D09Rik, Mrps35, EG545893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315F03.bB6Ng01-315F03.g
ACCGA106002GA106003
length446592
definitionB6Ng01-315F03.b B6Ng01-315F03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atccctctctgcttcctggcctgaaggctgttgtgtgagcaacagcctta
catttctgccaccaggcctcattgccaaaccttcccagccatcaacctga
ttgggaacaacaaggtgatgaaggaatgacagccacatgaacaggaaagc
tggggtcaggaggactgtactctctgtgatggagctgtgctgactctgat
ggagtgtgtctgcactcagactagaaggttttgccagttccatgcctgac
ccatatgggtaaggctttgccaacttcccatggctctgaggtcttggtct
ttgaaatagctcctgtcagataatacacacacactcagaacttcactctc
tcagggtctccttggctcccccacatctttgtcagacctctcaaacagct
cgattccctgcagatagctccttttcttctggcccaccgctcactc
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccctaatcatcagggaaatgcaaatcaaaacaaccctgagat
ttcacctcacaccagtcagaatagctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccatttttggtg
ggattacaagcttgtacaaccactctgaaaatcagtctggctgttcctca
gaaaattggatatagtactaccagagaatcccacaatacctctcctgggc
atatatccagaagatgtttcaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacggaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgcatttatgaaatttctaggcaa
atggatggacctggagggtatcattctgagtgcaaactttatatgcctca
gtacaggggaacaccagggccaagaagtgggagtgggtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_146033481_146033932
seq2: B6Ng01-315F03.b_46_497

seq1  GAATTCATCCCTCTCTGCTTCCTGGCCTGAAGGCTGTTGTGTGAGCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCTCTCTGCTTCCTGGCCTGAAGGCTGTTGTGTGAGCAACA  50

seq1  GCCTTACATTTCTGCCACCAGGCCTCATTGCCAAACCTTCCCAGCCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACATTTCTGCCACCAGGCCTCATTGCCAAACCTTCCCAGCCATCA  100

seq1  ACCTGATTGGGAACAACAAGGTGATGAAGGAATGACAGCCACATGAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATTGGGAACAACAAGGTGATGAAGGAATGACAGCCACATGAACAG  150

seq1  GAAAGCTGGGGTCAGGAGGACTGTACTCTCTGTGATGGAGCTGTGCTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGGGGTCAGGAGGACTGTACTCTCTGTGATGGAGCTGTGCTGAC  200

seq1  TCTGATGGAGTGTGTCTGCACTCAGACTAGAAGGTTTTGCCAGTTCCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGGAGTGTGTCTGCACTCAGACTAGAAGGTTTTGCCAGTTCCATG  250

seq1  CCTGACCCATATGGGTAAGGCTTTGCCAACTTCCCATGGCTCTGAGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCCATATGGGTAAGGCTTTGCCAACTTCCCATGGCTCTGAGGTCT  300

seq1  TGGTCTTTGAAATAGCTCCTGTCAGATAATACACACACACTCAGAACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTGAAATAGCTCCTGTCAGATAATACACACACACTCAGAACTTC  350

seq1  ACTCTCTCAGGGTCTCCTTGGCTCCCCCACATCTTTGTCAGACCTCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTCAGGGTCTCCTTGGCTCCCCCACATCTTTGTCAGACCTCTCAA  400

seq1  ACAGCTCGATTCCCTGCAGATAGCTCCTTTTCTTCTGGCCCACCGCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCGATTCCCTGCAGATAGCTCCTTTTCTTCTGGCCCACCGCTCAC  450

seq1  TC  452
      ||
seq2  TC  452