BAC Information

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BAC

Clone NameB6Ng01-317N13
Chromosome6 (Build37)
Map Location 62,057,491 - 62,105,690
singlet/doubletdoublet
Overlap geneC130092O11Rik
Upstream geneLOC100041764, LOC100042694
Downstream geneGA_x5J8B7W6GG0-4757855-4757501
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317N13.bB6Ng01-317N13.g
ACCGA107891GA107892
length1,0241,094
definitionB6Ng01-317N13.b B6Ng01-317N13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,057,491 - 62,058,519)(62,104,592 - 62,105,690)
sequence
gaattctctaacatttattggaaataagattttatttacttagttattat
ttcagattaattgataaattcaaacctaaggcaagatattccagaatgtg
cttcatattttgattcagattcactttcttaagaaggagcaaatctccac
tcttcatttaagttgcacacagagattggaggccactgcatcaatagggt
ccagtcctagacaccaggaagctggagtcactatgtcttggaaaatcaaa
aatagaaatgtactggttatgaacatgtttcttttgattttaataatttc
ctactttcacaaaataaaaagcttaatatggaaatatatatagtttaatt
ttaggttctggttaaatgagaattccataaaggagagtttctccaaggaa
gcaggtgattagtgacacatatatgttaacaggtggcatcactagaacag
agactgacttctaaacatttggtcttgaacagtgagcttatgaaggtctg
tgaaatagcagactccaggtcacatttcctcttaatcaagtgtgagtcct
cagatttctgccctgtactagtacagctcgttggtgccttactctgtatt
tgcaattgtggtgaccatagaaagcattgtattttaatggtcagtttatt
atatgcattcatagttttccgtcctttgtccactacaagtgcctagtgag
accttttttttttttaattaggtattttcttcatttatatttccaatgct
atcccaaaagtcccccataccctccccccaccacactgccttccccaccc
actcccacttcttggccctggcatttccctgtactgaggcatataaagtt
tgcaagaccaatgggcctccctttccagatgaattttgattaatatgtta
tattgtctataccgataatgaactcttactttttttgaacatggctgaca
ttcttattgttttgttttatctgacattaaagccttctttatgtatgact
gttgttataaaactgtactcattt
gaattctttgtatatattggatattagctccctgtaggatttaggattgg
taaagatttttcccaatctgttggttgcttttttgtcttattaaaattaa
atcttccaaacatttatcctgacctccttctagaagtctagacttcaact
cactgagtcccctcctgcctttaacatggttctagcaagaagaactttgg
ctcatcttcacatagtaccagaggaaaatttcctcctccttgaagtattt
gttaagatgtcttaaatttactaaagcatttgttacccattcactgaaag
aaaactatcatcttgaaattttcaagccaaatattccacatctgctttta
ttaatttctttctttagtatatcaatttacctactagtatcttttattta
ttagtgtatatatataattaaatattagtatatattaatatatattatac
atactagtatgatatatacatataatatataaaataaatatatatacata
tatatacatatatatatatatacatatatatatatatataatatgtcttt
cccctccagtaatttttagaagttgagacttcatgttttatttactagtt
tctcaagtttactgaataaagtgcttagaatgccttctaagactctgcaa
acatttggaaacaattgataagaatgaataaatgagttcagctcaaatat
gagctctaagtaaagatcataacagaagcaagctttgtaatgaaatgtac
ttcagcagtacatctgaaaaatgttaacattagttttaacacattgtgag
gaactcttctgccttaatcagaatgcagtattttcattaatgagcttatg
accacaagttcagttagtgcaggtttaataaaactgataacacacatggg
caagatgagagctgccattgagtctgacggagagacagttcaactaccat
attggacacagatgcttcgataccagcatgtagtctttgcttcattggag
gaaagtcgggaatgtttgaaagacacatggcttttgtagacagacgtgaa
acatgattgtcttgcgtgagttaggcagtgtctaccattgctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_62057491_62058519
seq2: B6Ng01-317N13.b_45_1068

seq1  GAATTCTCTAACATTTATTGGAAATAAGATTTTATTTACTTAGTTATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACATTTATTGGAAATAAGATTTTATTTACTTAGTTATTAT  50

seq1  TTCAGATTAATTGATAAATTCAAACCTAAGGCAAGATATTCCAGAATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTAATTGATAAATTCAAACCTAAGGCAAGATATTCCAGAATGTG  100

seq1  CTTCATATTTTGATTCAGATTCACTTTCTTAAGAAGGAGCAAATCTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATATTTTGATTCAGATTCACTTTCTTAAGAAGGAGCAAATCTCCAC  150

seq1  TCTTCATTTAAGTTGCACACAGAGATTGGAGGCCACTGCATCAATAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTTAAGTTGCACACAGAGATTGGAGGCCACTGCATCAATAGGGT  200

seq1  CCAGTCCTAGACACCAGGAAGCTGGAGTCACTATGTCTTGGAAAATCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCTAGACACCAGGAAGCTGGAGTCACTATGTCTTGGAAAATCAAA  250

seq1  AATAGAAATGTACTGGTTATGAACATGTTTCTTTTGATTTTAATAATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAATGTACTGGTTATGAACATGTTTCTTTTGATTTTAATAATTTC  300

seq1  CTACTTTCACAAAATAAAAAGCTTAATATGGAAATATATATAGTTTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCACAAAATAAAAAGCTTAATATGGAAATATATATAGTTTAATT  350

seq1  TTAGGTTCTGGTTAAATGAGAATTCCATAAAGGAGAGTTTCTCCAAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTCTGGTTAAATGAGAATTCCATAAAGGAGAGTTTCTCCAAGGAA  400

seq1  GCAGGTGATTAGTGACACATATATGTTAACAGGTGGCATCACTAGAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGATTAGTGACACATATATGTTAACAGGTGGCATCACTAGAACAG  450

seq1  AGACTGACTTCTAAACATTTGGTCTTGAACAGTGAGCTTATGAAGGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGACTTCTAAACATTTGGTCTTGAACAGTGAGCTTATGAAGGTCTG  500

seq1  TGAAATAGCAGACTCCAGGTCACATTTCCTCTTAATCAAGTGTGAGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGCAGACTCCAGGTCACATTTCCTCTTAATCAAGTGTGAGTCCT  550

seq1  CAGATTTCTGCCCTGTACTAGTACAGCTCGTTGGTGCCTTACTCTGTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCTGCCCTGTACTAGTACAGCTCGTTGGTGCCTTACTCTGTATT  600

seq1  TGCAATTGTGGTGACCATAGAAAGCATTGTATTTTAATGGTCAGTTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTGTGGTGACCATAGAAAGCATTGTATTTTAATGGTCAGTTTATT  650

seq1  ATATGCATTCATAGTTTTCCGTCCTTTGTCCACTACAAGTGCCTAGTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATTCATAGTTTTCCGTCCTTTGTCCACTACAAGTGCCTAGTGAG  700

seq1  ACCTTTTTTTTTTTTAATTAGGTATTTTCTTCATTTATATTTCCAATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTTTTTTTTTAATTAGGTATTTTCTTCATTTATATTTCCAATGCT  750

seq1  ATCCCAAAAGTCCCCCATACCCTCCCCCCACCACACTGCCTTCCCCACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAAAGTCCCCCATACCCTCCCCCCACCACACTGCCTTCCCCACCC  800

seq1  ACTCCCACTTCTTGGCCCTGGCATTTCCCTGTACTGAGGCATATAAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACTTCTTGGCCCTGGCATTTCCCTGTACTGAGGCATATAAAGTT  850

seq1  TGCAAGACCAATGGGCCTCCCTTTCCAGATGAATTTTGATTAATATGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGACCAATGGGCCTCCCTTTCCAGATGAATTTTGATTAATATGTTA  900

seq1  TATTGTCTATACCGATAATGAACTCTTACTTTTTTGAAACAAGGCTGACA  950
      |||||||||||||||||||||||||||||||||||  |||| ||||||||
seq2  TATTGTCTATACCGATAATGAACTCTTACTTTTTTTGAACATGGCTGACA  950

seq1  ATTTCTTATTGTTTTTGTTTTATCTGACATTAAAAGCTTCTTTAATGTAT  1000
        ||||||||| ||||||||||||||||||||||  ||||||| ||||||
seq2  --TTCTTATTG-TTTTGTTTTATCTGACATTAAAGCCTTCTTT-ATGTAT  996

seq1  GACTGTTTGTTATAAAACTGTACTCATTT  1029
      ||||| |||||||||||||||||||||||
seq2  GACTG-TTGTTATAAAACTGTACTCATTT  1024

seq1: chr6_62104592_62105690
seq2: B6Ng01-317N13.g_65_1158 (reverse)

seq1  TCAGCAATGGTAGACACTGCCT-ACTCACGCAAGACAATCATGTTTCACC  49
      |||||||||||||||||||||| ||||||||||||||||||||||||| |
seq2  TCAGCAATGGTAGACACTGCCTAACTCACGCAAGACAATCATGTTTCA-C  49

seq1  TTCTGTCTACAAAAGCCATGTGTCTTTCAAAACATTCCCGACTTTCCTCC  99
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTCTGTCTACAAAAGCCATGTGTCTTTC-AAACATTCCCGACTTTCCTCC  98

seq1  AATGAAGCAAAGACTTCCATGCTGGTATTCGAAGCATCTGTGTCCAATAT  149
      |||||||||||||| | |||||||||| ||||||||||||||||||||||
seq2  AATGAAGCAAAGAC-TACATGCTGGTA-TCGAAGCATCTGTGTCCAATAT  146

seq1  GGTAGTTTGAACTGTTCTCTCCGTCAGACTCAATGGCAGCTCTCATCTTG  199
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  GGTAG-TTGAACTG-TCTCTCCGTCAGACTCAATGGCAGCTCTCATCTTG  194

seq1  CCCATGTGTGTTATCAGTTTTATTAAACCTGCACTAACTGAACTTGTGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTGTGTTATCAGTTTTATTAAACCTGCACTAACTGAACTTGTGGT  244

seq1  CATAAGCTCATTAATGAAAATACTGCATTCTGATTAAGGCAGAAGAGTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCTCATTAATGAAAATACTGCATTCTGATTAAGGCAGAAGAGTTC  294

seq1  CTCACAATGTGTTAAAACTAATGTTAACATTTTTCAGATGTACTGCTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAATGTGTTAAAACTAATGTTAACATTTTTCAGATGTACTGCTGAA  344

seq1  GTACATTTCATTACAAAGCTTGCTTCTGTTATGATCTTTACTTAGAGCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTCATTACAAAGCTTGCTTCTGTTATGATCTTTACTTAGAGCTC  394

seq1  ATATTTGAGCTGAACTCATTTATTCATTCTTATCAATTGTTTCCAAATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGAGCTGAACTCATTTATTCATTCTTATCAATTGTTTCCAAATGT  444

seq1  TTGCAGAGTCTTAGAAGGCATTCTAAGCACTTTATTCAGTAAACTTGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAGTCTTAGAAGGCATTCTAAGCACTTTATTCAGTAAACTTGAGA  494

seq1  AACTAGTAAATAAAACATGAAGTCTCAACTTCTAAAAATTACTGGAGGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTAAATAAAACATGAAGTCTCAACTTCTAAAAATTACTGGAGGGG  544

seq1  AAAGACATATTATATATATATATATATGTATATATATATATATGTATATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATATTATATATATATATATATGTATATATATATATATGTATATA  594

seq1  TATGTATATATATTTATTTTATATATTATATGTATATATCATACTAGTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATATATTTATTTTATATATTATATGTATATATCATACTAGTAT  644

seq1  GTATAATATATATTAATATATACTAATATTTAATTATATATATACACTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATATATATTAATATATACTAATATTTAATTATATATATACACTAA  694

seq1  TAAATAAAAGATACTAGTAGGTAAATTGATATACTAAAGAAAGAAATTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAAGATACTAGTAGGTAAATTGATATACTAAAGAAAGAAATTAA  744

seq1  TAAAAGCAGATGTGGAATATTTGGCTTGAAAATTTCAAGATGATAGTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCAGATGTGGAATATTTGGCTTGAAAATTTCAAGATGATAGTTTT  794

seq1  CTTTCAGTGAATGGGTAACAAATGCTTTAGTAAATTTAAGACATCTTAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGTGAATGGGTAACAAATGCTTTAGTAAATTTAAGACATCTTAAC  844

seq1  AAATACTTCAAGGAGGAGGAAATTTTCCTCTGGTACTATGTGAAGATGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTCAAGGAGGAGGAAATTTTCCTCTGGTACTATGTGAAGATGAG  894

seq1  CCAAAGTTCTTCTTGCTAGAACCATGTTAAAGGCAGGAGGGGACTCAGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTCTTCTTGCTAGAACCATGTTAAAGGCAGGAGGGGACTCAGTG  944

seq1  AGTTGAAGTCTAGACTTCTAGAAGGAGGTCAGGATAAATGTTTGGAAGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAGTCTAGACTTCTAGAAGGAGGTCAGGATAAATGTTTGGAAGAT  994

seq1  TTAATTTTAATAAGACAAAAAAGCAACCAACAGATTGGGAAAAATCTTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTAATAAGACAAAAAAGCAACCAACAGATTGGGAAAAATCTTTA  1044

seq1  CCAATCCTAAATCCTACAGGGAGCTAATATCCAATATATACAAAGAATTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCTAAATCCTACAGGGAGCTAATATCCAATATATACAAAGAATTC  1094