BAC Information

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BAC

Clone NameB6Ng01-319N22
Chromosome6 (Build37)
Map Location 110,317,776 - 110,318,920
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043720
Downstream geneGrm7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319N22.bB6Ng01-319N22.g
ACCGA109393GA109394
length6351,121
definitionB6Ng01-319N22.b B6Ng01-319N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacaaaaccggacctatcatgactgcattccataagacccccc
aaaaaaatagctgaaagagttagatgcagatatttgcactcaaccaatgg
acagaagctgctgacccatgtggctgaattagggaaagtgtggaaaaagc
tgaggaggaaggaccagcagtctcatttaacgtggacctccaagttctct
caaacactggaccacccatcaggcagcatacaccagctgatgtgagcccc
caacaaataaacagcagaggactgctgggtctgtgttcaagcagagatga
tgtgcctaaccctcaagagactggaggcctcagagagtttagaggtctag
ttgggtgagggctgtggggagggaacatcctcctggagacagtgggtaag
gaggaggtatgggatgtgaaacagtcagagggtagaccaggagcaaggaa
taaaatctggactgtgaatagatagatagatagatagatagatagataga
tagatagatagatagatagatagatagatagatagatcattgacaaagga
aaagtaaaatactgtgttatctgtcggttggaataatcttgtatccttag
ggttaatctgtgattgaatgcttgtgttaaacctg
gaattcttcttatgatattcctttacataaatgccccagaaaataatata
gataaatattttggatgactggtacctacagacttgaattgaaacaagta
gtaaacctcacatcccagtgatagaacttatttacaactcagttatagac
ctcatatcataactgtttccagggattacaagtgaatttattacttcaac
cttgtaattattttagtgttaaagatgtgtcctgttcctacataacttgt
tgcacatttgctccagagtatttagtcgttaacctcaaataaggagatag
cattaaaagactctgctacttgatatttttgttacaaagtccttgatatg
ctgatcataatttcttttgtgatgtcacaaggcagaaaggtgtcccatta
tctggaagtgatgttgtccctttataatacccatcctgtgaagaacatgg
atataagtttggcaaccatcagttttacgttctagatcaataatagtctt
ggcttaggcaaaaggagcgacctaagcattatgagccttggtatctttat
attgaagctagtatctatctacttttaaggtttataataagaatttgtac
atacatgtgagtgtgcatgtcagtgttatgcatatttacatatgtgtggg
tgcaggtataaatctgcatgcatgtggaaaacaggagtcaacctctactg
ccataccttaggagctgtctatcttttgaaattcaccacttagattaggg
tgattggacaggaagacccccagaacctgccatctcaatttctccagcac
tggtattataactttgtgctgccatgcctacctttttaccagcctaaaag
ttacagatgaaactcttgacagctttgtccatgaattctttacttactag
cttcatgatacaggattgttccagaatattttcatacttgtagcagatac
taaatgacacccccataatataaaaattgagtcagatatcactgaaattt
tttttctgacatagagagttggtgatattttaatactgagtatatatgct
tgacagcagcataggggtgctgtgttacagagtatataatgcataggaat
cttaggttctgccatacaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110317776_110318920
seq2: B6Ng01-319N22.g_67_1187

seq1  GAATTCTTCTTATGATATTCCTTTACATAAATGCCCCAGAAAATAATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTATGATATTCCTTTACATAAATGCCCCAGAAAATAATATA  50

seq1  GATAAATATTTTGGATGACTGGTACCTACAGACTTGAATTGAAACAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATATTTTGGATGACTGGTACCTACAGACTTGAATTGAAACAAGTA  100

seq1  GTAAACCTCACATCCCAGTGATAGAACTTATTTACAACTCAGTTATAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCTCACATCCCAGTGATAGAACTTATTTACAACTCAGTTATAGAC  150

seq1  CTCATATCATAACTGTTTCCAGGGATTACAAGTGAATTTATTACTTCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATCATAACTGTTTCCAGGGATTACAAGTGAATTTATTACTTCAAC  200

seq1  CTTGTAATTATTTTAGTGTTAAAGATGTGTCCTGTTCCTACATAACTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAATTATTTTAGTGTTAAAGATGTGTCCTGTTCCTACATAACTTGT  250

seq1  TGCACATTTGCTCCAGAGTATTTAGTCGTTAACCTCAAATAAGGAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATTTGCTCCAGAGTATTTAGTCGTTAACCTCAAATAAGGAGATAG  300

seq1  CATTAAAAGACTCTGCTACTTGATATTTTTGTTACAAAGTCCTTGATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAGACTCTGCTACTTGATATTTTTGTTACAAAGTCCTTGATATG  350

seq1  CTGATCATAATTTCTTTTGTGATGTCACAAGGCAGAAAGGTGTCCCATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCATAATTTCTTTTGTGATGTCACAAGGCAGAAAGGTGTCCCATTA  400

seq1  TCTGGAAGTGATGTTGTCCCTTTATAATACCCATCCTGTGAAGAACATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGTGATGTTGTCCCTTTATAATACCCATCCTGTGAAGAACATGG  450

seq1  ATATAAGTTTGGCAACCATCAGTTTTACGTTCTAGATCAATAATAGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTTTGGCAACCATCAGTTTTACGTTCTAGATCAATAATAGTCTT  500

seq1  GGCTTAGGCAAAAGGAGCGACCTAAGCATTATGAGCCTTGGTATCTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGGCAAAAGGAGCGACCTAAGCATTATGAGCCTTGGTATCTTTAT  550

seq1  ATTGAAGCTAGTATCTATCTACTTTTAAGGTTTATAATAAGAATTTGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGCTAGTATCTATCTACTTTTAAGGTTTATAATAAGAATTTGTAC  600

seq1  ATACATGTGAGTGTGCATGTCAGTGTTATGCATATTTACATATGTGTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTGAGTGTGCATGTCAGTGTTATGCATATTTACATATGTGTGGG  650

seq1  TGCAGGTATAAATCTGCATGCATGTGGAAAACAGGAGTCAACCTCTACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTATAAATCTGCATGCATGTGGAAAACAGGAGTCAACCTCTACTG  700

seq1  CCATACCTTAGGAGCTGTCTATCTTTTGAAATTCACCACTTAGATTAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCTTAGGAGCTGTCTATCTTTTGAAATTCACCACTTAGATTAGGG  750

seq1  TGATTGGACAGGAAGACCCCCAGAACCTGCCATCTCAATTTCTCCAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGACAGGAAGACCCCCAGAACCTGCCATCTCAATTTCTCCAGCAC  800

seq1  TGGTATTATAACTTTGTGCTGCCATGCCTACCTTTTTACCAGCCTAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTATAACTTTGTGCTGCCATGCCTACCTTTTTACCAGCCTAAAAG  850

seq1  TTACAGATGAAACTCTTGACAGCTTTGTCCATGAATTCTTTACTTACTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATGAAACTCTTGACAGCTTTGTCCATGAATTCTTTACTTACTAG  900

seq1  CTTCATGAATACAGGATTGTTCCAGAATATTTTCATACTTGTAGCAGAAT  950
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTCATG-ATACAGGATTGTTCCAGAATATTTTCATACTTGTAGCAG-AT  948

seq1  ACTAAATGACA-CCCCATAATATAAAAATTGGAAGTCAGAATAATCAACC  999
      ||||||||||| |||||||||||||||||||  |||||||   ||||  |
seq2  ACTAAATGACACCCCCATAATATAAAAATTG--AGTCAGA--TATCA--C  992

seq1  TGAAATTTTTTTTTCTTGGACATAAGGAGGAGTTTGGTGATTATTTTAAA  1049
      ||||| ||||||||||  ||||||  |||    ||||||| |||||| ||
seq2  TGAAA-TTTTTTTTCT--GACATAGAGAG----TTGGTGA-TATTTT-AA  1033

seq1  TACCTGGAGGTATATATGCTTTGACAGCAGCATAGGGGTGCTTGTG-TAC  1098
      || |||   |||||||||| ||||||||||||||||||||| |||| |||
seq2  TA-CTG--AGTATATATGC-TTGACAGCAGCATAGGGGTGC-TGTGTTAC  1078

seq1  AGGAAGTATAT-ATGCATAAGGAAATCTAGTTTCTGCCCCATACAAGG  1145
      ||  ||||||| |||||| |||||   ||| |||||  ||||||||||
seq2  AG--AGTATATAATGCAT-AGGAATCTTAGGTTCTG--CCATACAAGG  1121