BAC Information

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BAC

Clone NameB6Ng01-320G08
Chromosome6 (Build37)
Map Location 137,719,799 - 137,720,888
singlet/doubletsinglet
Overlap geneDera
Upstream geneGucy2c, Hist4h4, H2afj, Wbp11, BC049715, C030030A07Rik, Art4, Mgp, Erp27, Arhgdib, Pde6h, Rerg, Ptpro, Eps8, Strap
Downstream gene9830102E05Rik, Mgst1, Lmo3, Igbp1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320G08.bB6Ng01-320G08.g
ACCGA109771GA109772
length1,0841,186
definitionB6Ng01-320G08.b B6Ng01-320G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtttctaactatttatctggtccctggaaaattagcaatattt
aaattggtcacttatcttgatgaaggttggacttaaaagttattatctgc
taaaaatgcgttaaattctttagactccagcttgtcttaacagcaagttt
tgaagtagccaccttctttttcaacacattaagtctttctgtagtcagtg
ttagccctttgctttctgaggtacatgcttgtaaaatgtgcaaattacag
ataatcaatcttcctgagaaatggaaatttacaattacatttttcattaa
atatactttttgaggttgctggtaggggtgcgtgtgtgtactcgatattg
gaaagcctggcctgaggtaactgattgcagatttacagatggatggatgg
taacagcatggcctttagtctgcaaggagtcattgtggtcctccttcagc
cttcgagcttacacttcccgcagctggtcctgcttgacactcactgctca
gagggggtgcacacctctgtctcttgtatgattgggctgaggccaggaca
ggcggtcagtgcttctcctgttgaggcagtgatggtaccctgggcagctg
ctgtgacatcttgtttggacagctggtaaatgctgctattgttctagttt
attatttatttacagacaaggtctcacatacctcaggaccagagaaaggc
cttaaagtcttgaccctccttgtctgcctgcacactccaagtgctgggat
gccaggcttgtgccactatgactggttttttgggttactcagatggaacc
caggggcactggtgttgactggctcctgtctgctgtcctagattgacctt
ccagtctctgctcagctgtgagccattaacacactgatctttctgttcca
gtcagctaggtaagttttcattatatattttcaagtgaaaggtctagtaa
aagccatggaagcaattgggggaatgctggtcgaaagcattgatcttccc
aggtaagtgtctcatattgtgctttcagtctctcatgtctgtctgcttca
cgctctctgtgttttctttagggtggcgcccccc
gaattccattcgaggggcaaacacacacatacacacacacacacacacac
acacacacacacacacacacacacacacctgttagtgtttacctgacact
aaccagggtcatttgggcagaaggaatcttaatcaagaattaaggattct
taattaaattagttaataagattagccagtaggcaagtctgtagggcata
ttcttgattgatgactgatgtgggctcactgtgggtggtgccacccctgg
actgatagtcctggatggtgtaagaaagcagactggacaagccatggaca
agccaataacagcactcctccatggccactgcatcagctcctgcctcagc
cgagttcccgctcagctgaatcctgccctgactttcctcagtgataaact
gttacctggaagtataagtgagataaaccccttcctccacaagttgcttt
ccgttgttgtgtttatcacagcaatggaaattgtagcagagcgagccatc
acagaagaaggagcaagagtaagagaaaaacacagagaaacaatgtattc
tggaaacagggctgctgtacatgcagactcatagctgccatggctgcctg
taggcttagatgtttcaaaacctacttaattaagggttcttaaatacttc
aacctttcttccagccctccaaccaaaggtagagaagaaagcctgtttag
aagtagtcctttgagatggtaccagtctttgttgtcaggacgtcaatagt
ctagtccaaaacattagacttgaatcagtaccggcagcctggtccaatca
gcaaacacatatcagtagcagcagctcgatccagaagaaaccatgaagct
ccaccaatttggtacaagtccacagaagcacccagaataaccatgagaag
ttctttggcaagtttctctctatgaagtcaaggcaagtgaagatcagtat
agaccagcaatactttgaaagaagaagcaaagcaagagcatcatttgcag
tctgttgggctctattttaatactctttcaacatcatgcgcccttttcaa
ctgttctggctcatcaaggcaatcggtctcatggtgttctgcctccaaga
aaaacattcctcctcatgtaatcttgcttcaaggaagcatcctctccatt
accagccttccaggagagatactaagagttctctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_137719799_137720888
seq2: B6Ng01-320G08.b_46_1129

seq1  GAATTCTGTTTCTAACTATTTATCTGGTCCCTGGAAAATTAGCAATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTCTAACTATTTATCTGGTCCCTGGAAAATTAGCAATATTT  50

seq1  AAATTGGTCACTTATCTTGATGAAGGTTGGACTTAAAAGTTATTATCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGTCACTTATCTTGATGAAGGTTGGACTTAAAAGTTATTATCTGC  100

seq1  TAAAAATGCGTTAAATTCTTTAGACTCCAGCTTGTCTTAACAGCAAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGCGTTAAATTCTTTAGACTCCAGCTTGTCTTAACAGCAAGTTT  150

seq1  TGAAGTAGCCACCTTCTTTTTCAACACATTAAGTCTTTCTGTAGTCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGCCACCTTCTTTTTCAACACATTAAGTCTTTCTGTAGTCAGTG  200

seq1  TTAGCCCTTTGCTTTCTGAGGTACATGCTTGTAAAATGTGCAAATTACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCTTTGCTTTCTGAGGTACATGCTTGTAAAATGTGCAAATTACAG  250

seq1  ATAATCAATCTTCCTGAGAAATGGAAATTTACAATTACATTTTTCATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAATCTTCCTGAGAAATGGAAATTTACAATTACATTTTTCATTAA  300

seq1  ATATACTTTTTGAGGTTGCTGGTAGGGGTGCGTGTGTGTACTCGATATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTTTTGAGGTTGCTGGTAGGGGTGCGTGTGTGTACTCGATATTG  350

seq1  GAAAGCCTGGCCTGAGGTAACTGATTGCAGATTTACAGATGGATGGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCTGGCCTGAGGTAACTGATTGCAGATTTACAGATGGATGGATGG  400

seq1  TAACAGCATGGCCTTTAGTCTGCAAGGAGTCATTGTGGTCCTCCTTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCATGGCCTTTAGTCTGCAAGGAGTCATTGTGGTCCTCCTTCAGC  450

seq1  CTTCGAGCTTACACTTCCCGCAGCTGGTCCTGCTTGACACTCACTGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGAGCTTACACTTCCCGCAGCTGGTCCTGCTTGACACTCACTGCTCA  500

seq1  GAGGGGGTGCACACCTCTGTCTCTTGTATGATTGGGCTGAGGCCAGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGTGCACACCTCTGTCTCTTGTATGATTGGGCTGAGGCCAGGACA  550

seq1  GGCGGTCAGTGCTTCTCCTGTTGAGGCAGTGATGGTACCCTGGGCAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGTCAGTGCTTCTCCTGTTGAGGCAGTGATGGTACCCTGGGCAGCTG  600

seq1  CTGTGACATCTTGTTTGGACAGCTGGTAAATGCTGCTATTGTTCTAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACATCTTGTTTGGACAGCTGGTAAATGCTGCTATTGTTCTAGTTT  650

seq1  ATTATTTATTTACAGACAAGGTCTCACATACCTCAGGACCAGAGAAAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATTTACAGACAAGGTCTCACATACCTCAGGACCAGAGAAAGGC  700

seq1  CTTAAAGTCTTGACCCTCCTTGTCTGCCTGCACACTCCAAGTGCTGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGTCTTGACCCTCCTTGTCTGCCTGCACACTCCAAGTGCTGGGAT  750

seq1  GCCAGGCTTGTGCCACTATGACTGGTTTTTTGGGTTACTCAGATGGAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCTTGTGCCACTATGACTGGTTTTTTGGGTTACTCAGATGGAACC  800

seq1  CAGGGGCACTGGTGTTGACTGGCTCCTGTCTGCTGTCCTAGATTGACCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCACTGGTGTTGACTGGCTCCTGTCTGCTGTCCTAGATTGACCTT  850

seq1  CCAGTCTCTGCTCAGCTGTGAGCCATTAACACACTGATCTTTCTGTTCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCTGCTCAGCTGTGAGCCATTAACACACTGATCTTTCTGTTCCA  900

seq1  GTCAGCTAGGTAAGTTTTCATTATATATTTTCAAGTGAAAGGTCTAGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTAGGTAAGTTTTCATTATATATTTTCAAGTGAAAGGTCTAGTAA  950

seq1  AAGCCATGGAAGCAATTGGGGGAATGCTGGTCGAAAGCATTGATCTTCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGCCATGGAAGCAATTGGGGGAATGCTGGTCGAAAGCATTGATCTT-CC  999

seq1  CAGGTAAGTTGTCTCATATTGTGCTTTCCAGTCTTCCTCATGTCTGTCTG  1050
      |||||||| |||||||||||||||||| ||||||  ||||||||||||||
seq2  CAGGTAAG-TGTCTCATATTGTGCTTT-CAGTCT--CTCATGTCTGTCTG  1045

seq1  CTTCACCGCTCTCCTGTG-TTTCTTTAGGGTGGCGCCCCCC  1090
      ||||| |||||| ||||| ||||||||||||||||||||||
seq2  CTTCA-CGCTCT-CTGTGTTTTCTTTAGGGTGGCGCCCCCC  1084