BAC Information

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BAC

Clone NameB6Ng01-323A04
Chromosome6 (Build37)
Map Location 10,445,644 - 10,446,803
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323A04.bB6Ng01-323A04.g
ACCGA111702GA111703
length1,135916
definitionB6Ng01-323A04.b B6Ng01-323A04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagggaacacacttccatttagtgttttgtaaatcttgatat
gattctcatttggattggtttgaattaaagcatatctcattacagtgagt
tttatataatatagaatatatgattaacattataacattctgtgttttct
gtcagtgaattactactgaaattgcatttggagcttccaataaaacatac
atatttgacttcctttccatgcctttctgatgagggctgacttgagaagc
agaatatgctgtaaatacaacaagcagacttgacagttatctgacatcct
aacatgccatttgttgttctgagcaactaagtcaacaatctgcagagcac
tgggaatggtcccttagacactggatggtattatttcttctttgctttcc
tatgaaaccttaagaggtttatgacacgtctggcttctcacccttcgagc
acattccttctctttagatttgcccagagaatttccaaaaattaactgga
gcataaaaaaataatgttatactctcttgcctctttaacctttggtaaaa
caatagaatataattttcaatccatgcatagtttgggtatatttctcaat
tctgtctcatattgtgtgttctagatattcactacattttgttctaaatg
tccatgacaagaacacatttatatgctatggaatgttttgatacaggcaa
tcattacaatatatgaaaaactaatttagtaacaacttattttttaataa
taccgaaacctgaaatgtcaatgtatactgaaagtgactttcacgaaatc
ttccatcaatttctctaccatctttcgtcatatttctgtatccttttgtc
tatctattgattttctattaaatatttatctatctacaatgtgatcagtg
agtcttgaagtttcttttatcctgaattacagtctggatttctaagctaa
catctccataatggcattcactaacccctgcagtgttcttcttgaacatc
tgtactcattctatctttatctacatgtgcattgcttatgatttaactaa
attcacaatttaccattatatgttaccatatctagagcaattatgaatct
ctctattaaacacatttattggatattgccatgta

gaattcctctgagtctgtagattgtttttggtaggatggccatttttact
atgttattcctacaaatccataagcatgggagttctattgaggtcttttt
tttttatttcttccttgaggtactttaagttctcatacagatctttcatt
tttctggttagagttataccacgatattttattttatattatttgaaact
atcatgaagggagttttcaaacctttaactatgaggtagcgtccatcttt
gtcattgagatgtgtttcttgtatacagcaaaatgctggatcctgattgc
aattcaagtctgttagcttatatgtttttattggggagttgattccattg
gttttgagagatattaatgacagatgattgttagttcctgttatatttgc
tgtgttgttggcatttcattatgtaattctctccttttggttttgttgtg
agatgattcacatcttgttttttctttggtgtaggtacccttcttatgtt
gggattttccttctataatcctctgtagaacaagattgctagatagatat
tgtttaaatttggttttattatggaatatcttggtttctccttctatcac
aattgagagttttgcaggctatagtacactgagcaggcatttccattatc
ttagagtctgcaggacatctgtccaggatcttcttggttttatagtctct
gttaagaactctagtattgttctaatagggctgcctttatatgttacatg
gccttttcccctcacagcctttaatattctttctttgttttgtgtattta
gcgttttgattcttagttaatgggagaattttcctttctggtataatcta
tttggtgttctgtaggcttcttcttcttcttcttcttctccttccccttt
ccccttccccttaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10445644_10446803
seq2: B6Ng01-323A04.b_47_1181 (reverse)

seq1  TACATGGCATATATTTCCAAATAAATGTGTTTATTAAGAGAGA-TCATAA  49
      ||||||||| ||||   | |||||||||||||| | ||||||| ||||||
seq2  TACATGGCA-ATAT---CCAATAAATGTGTTTAAT-AGAGAGATTCATAA  45

seq1  TGGCTTCTAGGATATTGTTAACATAT-ATGGTAAAATTTGTGAAATTTTA  98
      | || |||| |||| || |||||||| ||||||||  |||||||  ||||
seq2  TTGC-TCTA-GATA-TGGTAACATATAATGGTAAA--TTGTGAA--TTTA  88

seq1  GGTTTAAATCAATAAGCAAATGCACATTGTAGGAATTAAAGATAAGAATG  148
      |  ||||||| |||||| |||||||| |||||    ||||||| ||||||
seq2  G--TTAAATC-ATAAGC-AATGCACA-TGTAG---ATAAAGAT-AGAATG  129

seq1  AGTACAAGATGGTTCAAGGAAGAAACACTGGCAGGGGTTAGTGAATGCCA  198
      ||||| |||| |||||| |||| |||||| ||||||||||||||||||||
seq2  AGTAC-AGAT-GTTCAA-GAAG-AACACT-GCAGGGGTTAGTGAATGCCA  174

seq1  TTATGGAGATGTTAGCTTTAGAAATCCAGACTGTAATTCAGGATAAAAGA  248
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTATGGAGATGTTAGC-TTAGAAATCCAGACTGTAATTCAGGATAAAAGA  223

seq1  AACTTCAAGACTCACTGATCACATTGTAGATAGATAAATATTTAATAGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAAGACTCACTGATCACATTGTAGATAGATAAATATTTAATAGAA  273

seq1  AATCAATAGATAGACAAAAGGATACAGAAATATGACGAAAGATGGTAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATAGATAGACAAAAGGATACAGAAATATGACGAAAGATGGTAGAG  323

seq1  AAATTGATGGAAGATTTCCTGAAAGTCACTTTCAGTATACATTGACATTT  398
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAATTGATGGAAGATTTCGTGAAAGTCACTTTCAGTATACATTGACATTT  373

seq1  CAGGTTTCGGTATTATTAAAAAATAAGTTGTTACTAAATTAGTTTTTCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTCGGTATTATTAAAAAATAAGTTGTTACTAAATTAGTTTTTCAT  423

seq1  ATATTGTAATGATTGCCTGTATCAAAACATTCCATAGCATATAAATGTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTAATGATTGCCTGTATCAAAACATTCCATAGCATATAAATGTGT  473

seq1  TCTTGTCATGGACATTTAGAACAAAATGTAGTGAATATCTAGAACACACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCATGGACATTTAGAACAAAATGTAGTGAATATCTAGAACACACA  523

seq1  ATATGAGACAGAATTGAGAAATATACCCAAACTATGCATGGATTGAAAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGACAGAATTGAGAAATATACCCAAACTATGCATGGATTGAAAAT  573

seq1  TATATTCTATTGTTTTACCAAAGGTTAAAGAGGCAAGAGAGTATAACATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTATTGTTTTACCAAAGGTTAAAGAGGCAAGAGAGTATAACATT  623

seq1  ATTTTTTTATGCTCCAGTTAATTTTTGGAAATTCTCTGGGCAAATCTAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTATGCTCCAGTTAATTTTTGGAAATTCTCTGGGCAAATCTAAA  673

seq1  GAGAAGGAATGTGCTCGAAGGGTGAGAAGCCAGACGTGTCATAAACCTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAATGTGCTCGAAGGGTGAGAAGCCAGACGTGTCATAAACCTCT  723

seq1  TAAGGTTTCATAGGAAAGCAAAGAAGAAATAATACCATCCAGTGTCTAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTCATAGGAAAGCAAAGAAGAAATAATACCATCCAGTGTCTAAG  773

seq1  GGACCATTCCCAGTGCTCTGCAGATTGTTGACTTAGTTGCTCAGAACAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATTCCCAGTGCTCTGCAGATTGTTGACTTAGTTGCTCAGAACAAC  823

seq1  AAATGGCATGTTAGGATGTCAGATAACTGTCAAGTCTGCTTGTTGTATTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCATGTTAGGATGTCAGATAACTGTCAAGTCTGCTTGTTGTATTT  873

seq1  ACAGCATATTCTGCTTCTCAAGTCAGCCCTCATCAGAAAGGCATGGAAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATATTCTGCTTCTCAAGTCAGCCCTCATCAGAAAGGCATGGAAAG  923

seq1  GAAGTCAAATATGTATGTTTTATTGGAAGCTCCAAATGCAATTTCAGTAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAAATATGTATGTTTTATTGGAAGCTCCAAATGCAATTTCAGTAG  973

seq1  TAATTCACTGACAGAAAACACAGAATGTTATAATGTTAATCATATATTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACTGACAGAAAACACAGAATGTTATAATGTTAATCATATATTCT  1023

seq1  ATATTATATAAAACTCACTGTAATGAGATATGCTTTAATTCAAACCAATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATAAAACTCACTGTAATGAGATATGCTTTAATTCAAACCAATC  1073

seq1  CAAATGAGAATCATATCAAGATTTACAAAACACTAAATGGAAGTGTGTTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGAATCATATCAAGATTTACAAAACACTAAATGGAAGTGTGTTC  1123

seq1  CCTGAAGAATTC  1160
      ||||||||||||
seq2  CCTGAAGAATTC  1135


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