BAC Information

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BAC

Clone NameB6Ng01-324A16
Chromosome6 (Build37)
Map Location 109,134,475 - 109,135,628
singlet/doubletsinglet
Overlap genenone
Upstream geneSumf1, Itpr1, LOC677205, Bhlhb2, Arl8b, Edem1, EG627371
Downstream geneLOC639110, LOC100043720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324A16.bB6Ng01-324A16.g
ACCGA112461GA112462
length9561,148
definitionB6Ng01-324A16.b B6Ng01-324A16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactcaagccatctggacttggaccttttttgtttgggaggg
ttttttttttaacgtattttcctcaattacatatccaatgctatcccaaa
agtcccccataccctcccccccccacttccctacccacccattcccactt
tttggccctggcgttcccctgtactggggcatataaagtttgcatgtcca
atgggcctctctttccagtgatggccaactaagtcatcttttgatgcata
tgcagctagagtcaagagcttcggggtactggttagttcataatgttgct
gcacctacagggttgcagatctctttagctccttagatactttctctagc
tcctccattgggggccctgtgatccatccaatagctgactgtgaggatcc
acttatgtgtttgctaggccccggcctagtcttataagagacatctatat
cagggtcctttcagcaaactcttgctagtgtatgcaatggtgtcatcgtt
tggaggctgattatgggatggatccctggatatggcagtctctagatgtc
catccttttgtctcggctccaaactttgtctctgtaactccttccatggg
tgattgttcctcttaggggatgtgggcctatttagatcatttactgactc
ttgatttaactttggtatatagtatctgtctagaaaatcatccatttcat
cttaattttccagttttgttgattatatacttttgtagtagaatctgatt
tttttttaatatcctgtttctgttcttatgtctcccttttcatttctgac
ttttgtcaatttggatactgtttctgccctttgatttagtttggctaggg
gttttatctaccttgttgattttctcaaagaatcatctttttagttttgt
tgattcttgtatctttgtttctatttgggttgatttttgaacagactttg
acaatt

gaattctcataggcacagagtcatgccagtgggctatgcattcccattaa
acacagcatgaagattcttatgttggaacctgatagccttggtggataac
tggatttccatatagggtgaacattatgtttttggtgagcaagttggtta
gagctatagctctacttcaggatgtctaggaaattcatggggcacaacca
aaacatcatttgatgtgacatttcatgatgaataaaggaaaaattggttt
ttattatctgagaatttctgtaatgggaaaaaggaatgttggaattagaa
atattgggatgatcagctttcatttgacattgttaaagtacccgatttta
tataaaatgttcccaaagtcattatcttagattcagtttcatccatccat
agacatttctgtgttaaatgccagggttccaggactgccacgcctcctcc
tttgacaaaacaaaatacagatagaatgctgggagaaatgtatcttagca
tgtgatactcacttgaaaaaatagaagggagaacaaaatgatgtcctacc
aggttctgagaagcagacatgtcctacttgaactaactccgtcatttggt
atgaaaccagaagccagtgtatgtcagtataagctcagcttgtaaaacac
attggataacattagttcccttgccatcagaggacacagtgacattttat
agacaaatcctacaataaagagagcacagaaccctggggaatgtttttag
aggaagggaaattattttgagattccttctatttttaaatcatatttaca
gcgacactgtgggtatgtaagaataggcaatgattgtgagactgatattt
ccttggtaatcaaaagatgagtctttgaggtggactcattctaagttaac
agcttgctttagctttttaaagatgaattcttatgaccaacagagtaggg
tgtgggtgtgggtagacattttcatattcttagggttatgctgtttttta
ttaattacatgatgagaaaaagcatgacaatttctaccctctgatacttt
ttttttccttttttgtggaggcatccatgaaggtcttcaggtttatttga
gcctatcatgactgtgtagtccattcatgaagcctagtcttggtttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109134475_109135628
seq2: B6Ng01-324A16.g_65_1212

seq1  GAATTCTCATAGGCACAGAGTCATGCCAGTGGGCTATGCATTCCCATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATAGGCACAGAGTCATGCCAGTGGGCTATGCATTCCCATTAA  50

seq1  ACACAGCATGAAGATTCTTATGTTGGAACCTGATAGCCTTGGTGGATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCATGAAGATTCTTATGTTGGAACCTGATAGCCTTGGTGGATAAC  100

seq1  TGGATTTCCATATAGGGTGAACATTATGTTTTTGGTGAGCAAGTTGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTCCATATAGGGTGAACATTATGTTTTTGGTGAGCAAGTTGGTTA  150

seq1  GAGCTATAGCTCTACTTCAGGATGTCTAGGAAATTCATGGGGCACAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATAGCTCTACTTCAGGATGTCTAGGAAATTCATGGGGCACAACCA  200

seq1  AAACATCATTTGATGTGACATTTCATGATGAATAAAGGAAAAATTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCATTTGATGTGACATTTCATGATGAATAAAGGAAAAATTGGTTT  250

seq1  TTATTATCTGAGAATTTCTGTAATGGGAAAAAGGAATGTTGGAATTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATCTGAGAATTTCTGTAATGGGAAAAAGGAATGTTGGAATTAGAA  300

seq1  ATATTGGGATGATCAGCTTTCATTTGACATTGTTAAAGTACCCGATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGGATGATCAGCTTTCATTTGACATTGTTAAAGTACCCGATTTTA  350

seq1  TATAAAATGTTCCCAAAGTCATTATCTTAGATTCAGTTTCATCCATCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATGTTCCCAAAGTCATTATCTTAGATTCAGTTTCATCCATCCAT  400

seq1  AGACATTTCTGTGTTAAATGCCAGGGTTCCAGGACTGCCACGCCTCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTCTGTGTTAAATGCCAGGGTTCCAGGACTGCCACGCCTCCTCC  450

seq1  TTTGACAAAACAAAATACAGATAGAATGCTGGGAGAAATGTATCTTAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACAAAACAAAATACAGATAGAATGCTGGGAGAAATGTATCTTAGCA  500

seq1  TGTGATACTCACTTGAAAAAATAGAAGGGAGAACAAAATGATGTCCTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATACTCACTTGAAAAAATAGAAGGGAGAACAAAATGATGTCCTACC  550

seq1  AGGTTCTGAGAAGCAGACATGTCCTACTTGAACTAACTCCGTCATTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTGAGAAGCAGACATGTCCTACTTGAACTAACTCCGTCATTTGGT  600

seq1  ATGAAACCAGAAGCCAGTGTATGTCAGTATAAGCTCAGCTTGTAAAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACCAGAAGCCAGTGTATGTCAGTATAAGCTCAGCTTGTAAAACAC  650

seq1  ATTGGATAACATTAGTTCCCTTGCCATCAGAGGACACAGTGACATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATAACATTAGTTCCCTTGCCATCAGAGGACACAGTGACATTTTAT  700

seq1  AGACAAATCCTACAATAAAGAGAGCACAGAACCCTGGGGAATGTTTTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATCCTACAATAAAGAGAGCACAGAACCCTGGGGAATGTTTTTAG  750

seq1  AGGAAGGGAAATTATTTTGAGATTCCTTCTATTTTTAAATCATATTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGAAATTATTTTGAGATTCCTTCTATTTTTAAATCATATTTACA  800

seq1  GCGACACTGTGGGTATGTAAGAATAGGCAATGATTGTGAGACTGATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACACTGTGGGTATGTAAGAATAGGCAATGATTGTGAGACTGATATTT  850

seq1  CCTTGGTAATCAAAAGATGAGTCTTTGAGGTGGACTCATTCTAAGTTAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTAATCAAAAGATGAGTCTTTGAGGTGGACTCATTCTAAGTTAAC  900

seq1  AGCTTGCTTTAGCTTTTTAAAGATGAATTCTTAATGACCAACAGAGGTAG  950
      |||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  AGCTTGCTTTAGCTTTTTAAAGATGAATTCTT-ATGACCAACAGA-GTAG  948

seq1  GGTGTGGGTGTGGGTAGACATTTTCCATTATTCTTAGGGTTATGCTGTTT  1000
      |||||||||||||||||||||||||   ||||||||||||||||||| ||
seq2  GGTGTGGGTGTGGGTAGACATTTTC--ATATTCTTAGGGTTATGCTG-TT  995

seq1  TTTTATTTAATTTACATGATGAG-AAAAGCATGACAAATTTCTACCCTTC  1049
      |||||||  | |||||||||||| ||||||||||| ||||||||||||  
seq2  TTTTATT--AATTACATGATGAGAAAAAGCATGAC-AATTTCTACCCT--  1040

seq1  CTGATACTTTTTTTT--CCTTTTTGTGGAGGCCATCATG-AGGTC-TCAG  1095
      |||||||||||||||  | |||||||||||||   |||| ||||| ||||
seq2  CTGATACTTTTTTTTTCCTTTTTTGTGGAGGCATCCATGAAGGTCTTCAG  1090

seq1  TGTATTTTGAG-CTATCATGACTTGTG-AGTCTA-TCATGAAGCCTCAAA  1142
        |  |||||| |||||||||| |||| |||| | |||||||||||   |
seq2  GTTTATTTGAGCCTATCATGAC-TGTGTAGTCCATTCATGAAGCCT---A  1136

seq1  GTCTTTGTTTAT  1154
      ||||| ||||||
seq2  GTCTTGGTTTAT  1148


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