BAC Information

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BAC

Clone NameB6Ng01-326C14
Chromosome6 (Build37)
Map Location 130,255,333 - 130,256,090
singlet/doubletsinglet
Overlap geneLOC100038898, Klra12, Klra13
Upstream gene4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, Klra10
Downstream geneKlra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326C14.bB6Ng01-326C14.g
ACCGA114038GA114039
length1,227730
definitionB6Ng01-326C14.b B6Ng01-326C14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacaggagagaaacattacaaatataatgaatgtggaaaatct
tttgcacataactcagagcttaaatttcactacagaatccatacaggaga
gaagccttacaaatgtactgaatgtggcaaatcttttacaaggaacacag
cctttaaagttcactacagaatccatataggagagacagcttacaaatat
aataagtgtgacaaatcttttacacaagcctccaaacttcaagttcacta
cagaacccatacaggaaagaagccttacaaagataatgaacgtggcaaat
cttgtatatggaacatagagcattaagttccttacagtatccatacagga
gagaaaccttacaaattttttgattgtggcaaatcatttacatagaactc
agagcttaaaattcagccaagagtctgtacaggggacaaactttatgaat
ataatgaatgctgcaaatcttttacacaacactcagatcatgaagcacac
cacagaatccatactggagagaaaccttacaaatgaaatgaaggtggcat
atcattcactaactctccaagtctttatttcagtacagaatccacataag
agataaaccttacaaatgtggtctatgtcttatctttcacctggttctcc
cttttccatgttcaacaaagaacccatactggaaaacagccttgtaagtg
tagtgactttgggaaatacttttccctgtcctcaaatcttcaatatcacc
taagaatacaaactagagacaaccttattaatgtaaagaatgtgaaaaat
ccttgacatggaaataatgccttcaaacacaacccagcatgcatcctgga
gagaaacattacaaatataaaggacatgacaaatattttcacacaacctc
aaagcttggagcacatagaattatgcatgatgctaacttaatagaaaatt
attgtcccaccattcatagtgaaacattatttaaaatgagaaattgttag
aatttaaataatgttgaaaccctattaccagaagaatttcataaagaaac
cttatattgatagtatttggaagcattttacccacaatcactatatttta
tgctagtactaatttcaaaataatatgaaaactctttcacctaacgtatc
atctgacgtatgactaaatattatgattagtttatctaagaaccgatcta
atgtaagtttaaccgaaatatagggac
gaattccatgacagccaggcgatacagagaaaccctgtctcaaaaaaaaa
aaaaaaaaaaaaaacaaccaaaaccaaaccaaaccaaaaaaccactttct
tcttgcatgagagtattgtttcttttcttttcttttcttttcttttcttt
tcttttcttttcttttcttttcttttcttttcttttcttttctcttctct
tctcttctcttctcttctcttctcttctcttcttttcttttcttttcttt
tatcttttttttttctggtggggttaggggaaggtttcaagatagggttt
ctctgtgtagccctgggtatccaggaactcactctgtagaccaggctggc
ctcaatcttagaaatcaacctccctctgtctcccaactgttaggattaaa
ggcatggaccaccactgccagattaaagtgttgtttctaatgcataaatg
cttcatgtccttaggagttcatttctctaaacatttcatggtttttaaca
ctagttttatgttagcttaagattcagattcttcttgactagactaatac
tactactactactactactactactactactactactactactactacta
ctagtgtcctaatgttaatctatccttgattctcaagtaatttcattttt
tcagattccatattctactcagtatatatgattattccttaccaatatca
tctaaccagaggttatattcttctgttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130255333_130256090
seq2: B6Ng01-326C14.g_68_797

seq1  GAATTCCATGACAGCCAGGCGATACAGAGAAACCCTGTCTCAAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGACAGCCAGGCGATACAGAGAAACCCTGTCTCAAAAAAAAA  50

seq1  AAAAAAAAAAAAAACAACCAAAACCAAACCAAACCAAAAAACCACTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAACAACCAAAACCAAACCAAACCAAAAAACCACTTTCT  100

seq1  TCTTGCATGAGAGTATTGTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCATGAGAGTATTGTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT  150

seq1  TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTCTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTCTTCTCT  200

seq1  TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTTTTCTTTTCTTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTTTTCTTTTCTTTTCTTT  250

seq1  TATCTTTTTTTTTTCTGGTGGGGTTAGGGGAAGGTTTCAAGATAGGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTTTTTTTCTGGTGGGGTTAGGGGAAGGTTTCAAGATAGGGTTT  300

seq1  CTCTGTGTAGCCCTGGGTATCCAGGAACTCACTCTGTAGACCAGGCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTAGCCCTGGGTATCCAGGAACTCACTCTGTAGACCAGGCTGGC  350

seq1  CTCAATCTTAGAAATCAACCTCCCTCTGTCTCCCAACTGTTAGGATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCTTAGAAATCAACCTCCCTCTGTCTCCCAACTGTTAGGATTAAA  400

seq1  GGCATGGACCACCACTGCCAGATTAAAGTGTTGTTTCTAATGCATAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGACCACCACTGCCAGATTAAAGTGTTGTTTCTAATGCATAAATG  450

seq1  CTTCATGTCCTTAGGAGTTCATTTCTCTAAAACATTTCATGGTTTTTTAA  500
      |||||||||||||||||||||||||||| ||||||||||||||||||  |
seq2  CTTCATGTCCTTAGGAGTTCATTTCTCT-AAACATTTCATGGTTTTT--A  497

seq1  ACACTAGTTTTTATGTTAGCTTTAAAGATTTCAGAATTCTTCTTGACTAG  550
      ||||||| ||||||||||||||  |||| ||||| |||||||||||||||
seq2  ACACTAG-TTTTATGTTAGCTT--AAGA-TTCAG-ATTCTTCTTGACTAG  542

seq1  ACTAAATACTACTACTACTACTACTACTACTACTACTACTACTACTACTA  600
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACT-AATACTACTACTACTACTACTACTACTACTACTACTACTACTACTA  591

seq1  CTACTACTACTAGTGTCCTAATGGTTTAATCTATCCTTGATTCTCAAGTA  650
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  CTACTACTACTAGTGTCCTAATG--TTAATCTATCCTTGATTCTCAAGTA  639

seq1  ATTTCATTTTTTTTTCAGATTCCCATTATTCTACTCAGTATATATGATTT  700
      ||||||   ||||||||||||||   ||||||||||||||||||||| ||
seq2  ATTTCA---TTTTTTCAGATTCC--ATATTCTACTCAGTATATATGA-TT  683

seq1  ATTCCCTTACCAATAATCATCTAAAAACCAGAAAGGTTATATTTTTCTTT  750
      ||| |||||||||| |||||||   ||||||  ||||||||||     ||
seq2  ATT-CCTTACCAAT-ATCATCT---AACCAG--AGGTTATATT----CTT  722

seq1  CTGTTTTT  758
      ||||||||
seq2  CTGTTTTT  730