BAC Information

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BAC

Clone NameB6Ng01-326I04
Chromosome6 (Build37)
Map Location 59,650,851 - 59,651,874
singlet/doubletsinglet
Overlap genenone
Upstream geneHerc3, Nap1l5, D430015B01Rik, Tigd2, Gprin3
Downstream geneEG634166, EG627108, EG434019, LOC671300, EG627178, LOC100041706, LOC100041717, A530053G22Rik, LOC667066, LOC100041726
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326I04.bB6Ng01-326I04.g
ACCGA114303GA114304
length1,2391,093
definitionB6Ng01-326I04.b B6Ng01-326I04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacttggacaaccagatccttctatggcaaagcttttattgctac
aacatgaggaagaccccgaacctggaaaatgttgctgcttatatagcctg
cagtatgacgtttcagcacttgatgtggcatgacagcacctgattagttg
cttgaccatcaccccattactacgccccaagatgggcagtgactgggcgt
gaatttactcttgcacttgtgcataaggcttgtttactagttggcgcagt
ggaagccagtgccatctcataatggtgattgctcacagcacggttctcca
catcttcccctttttattttattaaaatttgaggctggtctaggcctctg
cagtcatgtccatctgccgtggctcatgtattaggtcatttctccaatgt
catagcctttcctttcatagggtaaccctattgccaccgggtcccatgtc
ttaggttggtctgtacatgaggaaagttgcccatctctggataccgcaat
actgtgtgacagtaactggtaaatgacctagggcgaacactataaaagag
gccaaccaaaaaatgaattagtaaaactcagctaagtgcaagtgctgatc
aatgagcattgagtatttctcatcccagtgcaatggatccacaaatccgt
gggacgcaataacagagaactcaaatgccatttaagtcttaagcatagaa
agccaaatttcaggggaagccccttgttcaatggatgcaagtgcctgagt
aataacgaccttgtcacagttttgttaggttctgagcttacaaacaaacc
agctcatgaacacaagtccacagcagatggcagcagaaaataaaactaca
ttcacccattccttaaaataagaaaatgcagatgaaatccaggaggagag
gccctttgtcaatgacaggtccactcgagtcgagttgatccttaaaactg
acactctcaggcctctagagtctcattgaaccccttggaccatttcctgc
agatacaggagagctgtctagacagattagcagcaccgagtaaatttcat
atggacactggtatgcacagagcacccattttctttcacagcccactgag
ccaactggtatagaaacactatttggtctcacagaatcgagggttgaatt
caaatcatcagcattccctcaactgacctagcgagtttgcactgatggca
ctagccgaatcgactgtaagaccgtaattaattttaatc
gaattccaggacagccagggttatacagagaaaccttgtatcgaaaaaac
caaaaaagaaaaataaaacaaaacaaaaacaaaaacaaacaaacaaaaag
cctggtctatgggtctcattttcagaaattaaaatgggctagagttgtca
gaaaatgcctgagatttatatggtggcaaaagcaacagtagaatctttcc
tcaaatactattacacacatccatgaagcaacatgcatgctttaatgcac
acacatacaggctcttacatttgaatacttggtcactagagagagttgct
gcttgagagagatttgaaggttggccttgtggcagtcgatgtgatcttgt
tggaagaagtgcactgggagtgaggtttgaggtttctaatgctaaaggca
tgtccagtgtctcttcctgtttcatgatgattaggatttgggactctgaa
ttccttccccagaactgacagtgcccatgccatccaccatgctgattatg
actaaatgtctaaatctgtaagcttaccttcataggagttaggtcttcat
ggtgtgttttaccagcaacagaatattttgtaagacatgtccatcattgt
ttcttcttggaattaaaaaaaaaaaaaaatgtccaaataaagaaaatcag
acaaaccttttgttgttttgggtatttgttttgttttttgtttagttggt
tttgttctttgaggaagttgtcaaagagcattaatctgaaatggagaatc
ttaaaagttaaaataatcaacatgagtaaaaacatatttctgatatcaat
tgtgaccataaaggctttcaattatccagacttctgtagagtgtggatgc
acctacatttgtgagttcagctcggtataattgacatcatgcataaaatc
tagatttaatatcaccctaaaattttgtgtcattgtttggaatcctgtta
tttaactatttttcatgtatctcatgaaatatgtgtgaaagaaacatccc
attcagaaaagtgaagcatcccttcctgttttcaagcacacagcacttcc
atgcaacaatttgcagcagaaccatatctgcattgatagcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_59650851_59651874
seq2: B6Ng01-326I04.g_157_1160

seq1  CAAACAAAAAGCCTGGTCTATGGGTCTCATTTTCAGAAATTAAAATGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAAGCCTGGTCTATGGGTCTCATTTTCAGAAATTAAAATGGGC  50

seq1  TAGAGTTGTCAGAAAATGCCTGAGATTTATATGGTGGCAAAAGCAACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTGTCAGAAAATGCCTGAGATTTATATGGTGGCAAAAGCAACAGT  100

seq1  AGAATCTTTCCTCAAATACTATTACACACATCCATGAAGCAACATGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTTTCCTCAAATACTATTACACACATCCATGAAGCAACATGCATG  150

seq1  CTTTAATGCACACACATACAGGCTCTTACATTTGAATACTTGGTCACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGCACACACATACAGGCTCTTACATTTGAATACTTGGTCACTAG  200

seq1  AGAGAGTTGCTGCTTGAGAGAGATTTGAAGGTTGGCCTTGTGGCAGTCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTGCTGCTTGAGAGAGATTTGAAGGTTGGCCTTGTGGCAGTCGA  250

seq1  TGTGATCTTGTTGGAAGAAGTGCACTGGGAGTGAGGTTTGAGGTTTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTTGTTGGAAGAAGTGCACTGGGAGTGAGGTTTGAGGTTTCTAA  300

seq1  TGCTAAAGGCATGTCCAGTGTCTCTTCCTGTTTCATGATGATTAGGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAGGCATGTCCAGTGTCTCTTCCTGTTTCATGATGATTAGGATTT  350

seq1  GGGACTCTGAATTCCTTCCCCAGAACTGACAGTGCCCATGCCATCCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCTGAATTCCTTCCCCAGAACTGACAGTGCCCATGCCATCCACCA  400

seq1  TGCTGATTATGACTAAATGTCTAAATCTGTAAGCTTACCTTCATAGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATTATGACTAAATGTCTAAATCTGTAAGCTTACCTTCATAGGAGT  450

seq1  TAGGTCTTCATGGTGTGTTTTACCAGCAACAGAATATTTTGTAAGACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTTCATGGTGTGTTTTACCAGCAACAGAATATTTTGTAAGACATG  500

seq1  TCCATCATTGTTTCTTCTTGGAATTAAAAAAAAAAAAAAATGTCCAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCATTGTTTCTTCTTGGAATTAAAAAAAAAAAAAAATGTCCAAATA  550

seq1  AAGAAAATCAGACAAACCTTTTGTTGTTTTGGGTATTTGTTTTGTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATCAGACAAACCTTTTGTTGTTTTGGGTATTTGTTTTGTTTTTT  600

seq1  GTTTAGTTGGTTTTGTTCTTTGAGGAAGTTGTCAAAGAGCATTAATCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTTGGTTTTGTTCTTTGAGGAAGTTGTCAAAGAGCATTAATCTGA  650

seq1  AATGGAGAATCTTAAAAGTTAAAATAATCAACATGAGTAAAAACATATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAATCTTAAAAGTTAAAATAATCAACATGAGTAAAAACATATTT  700

seq1  CTGATATCAATTGTGACCATAAAGGCTTTCAATTATCCAGACTTCTGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATCAATTGTGACCATAAAGGCTTTCAATTATCCAGACTTCTGTAG  750

seq1  AGTGTGGATGCACCTACATTTGTGAGTTCAGCTCGGTATAATTGACATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGATGCACCTACATTTGTGAGTTCAGCTCGGTATAATTGACATCA  800

seq1  TGCATAAAATCTAGATTTAATATTCACCCTAAAATTTTGTGTCATTGTTT  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGCATAAAATCTAGATTTAATA-TCACCCTAAAATTTTGTGTCATTGTTT  849

seq1  GGAATCCTGTTATTTAACTATTTTTCATGTATCTCATTGAAAATATTGTG  900
      |||||||||||||||||||||||||||||||||||||   ||||| ||||
seq2  GGAATCCTGTTATTTAACTATTTTTCATGTATCTCAT--GAAATA-TGTG  896

seq1  TGAAAGAAACATCCCA-TCAGAAAAAGTGAAGGCAATCCCCTTTCCTGTT  949
      |||||||||||||||| |||| ||||||||||   |||||  ||||||||
seq2  TGAAAGAAACATCCCATTCAG-AAAAGTGAAG--CATCCC--TTCCTGTT  941

seq1  TTTCAGCAACACCAGCACTTTTCTATGCAACCATTTTGGCCAGCAGGGAA  999
      ||  ||| ||| ||||||  ||| ||||||| ||||    |||||  |||
seq2  TTCAAGC-ACA-CAGCAC--TTCCATGCAACAATTT---GCAGCA--GAA  982

seq1  CACATATCTGCCATTGATAAGCAAC  1024
      | |||||||| ||||||| ||||||
seq2  C-CATATCTG-CATTGAT-AGCAAC  1004