BAC Information

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BAC

Clone NameB6Ng01-326K06
Chromosome6 (Build37)
Map Location 20,073,560 - 20,074,639
singlet/doubletsinglet
Overlap genenone
Upstream geneEif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326K06.bB6Ng01-326K06.g
ACCGA114400GA114401
length9301,085
definitionB6Ng01-326K06.b B6Ng01-326K06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggtttctccatctatggtaattgagagtttggcctggtata
gtagcctgggctggcatttgtgttctcttagtgtctgtataacatctgtc
caggctcttctgggtttcatagtctctggtgaaaagtctggtgtaattct
gataggccttcctttatatgttacttgacctttctcccttaatgctttta
atattctatctttatttagtgcatttgttgttctgattattgtgtgtcag
gaagaatttcctttctggtccagtctatttggagttctgtaggcttcttg
tatgatcatgggcatctctttctttatgtttgggaagttttcttcaatta
ttttgttgaagatgtttgctggtcctttgagttgaaaatcttcattctca
tccactcctattatccgtaggtttggtcttctcattgtgtcctggatttc
ctggatgttttgagttaggatccttttgcattttgtattttctttgactg
ttgtgtcgatgttctctatggaatcttctgcacctgagattctctcttcc
atttcttgtattctgttgctgatgctcgcatctatggttccagatctctt
tcctagggtttctatctccagcgttgcctcgctttgggttttctttattg
tgtctacttccctttttagatctagtatggttttgttcatttccatcacc
tgtttggatgtgctttcctgtttttctttaaggacttctacctgtttggt
tgtgttttcctgcttttctttaagggcctgtaactctttagcagtgctct
cctgtaattctttaagtgacttatgaaagtccttcttgatgtcctctatc
atcatcatgagaaatatttttaaatctgggtctaaattttcggttgtgtt
ggggtgcccaggactagtggggtgggagtg

gaattctgtggcattagcacgtataaacagtatataggctgagacataaa
attcttaaaatgtactactaaaggaaacgaagccaagaggtgagcttcat
taaaccaccaaggagtcataaatcttgtctttccatgcttctgatagaca
tttggagagcattgtttatgttattcctgatgtgaccaatctttttttcc
tcctcttttctattttgtttgtttgtttttttctctattgttttgtctac
ttaaaataattgtactacctattcccatgaccttagaacttatgctagca
actatcctcaaaagtggttatcttttataggattgttttccccttttact
taaattccatcatctgttccctgaaagtgcagcatcacaccactgacctt
aaatgaagactactttggaaatgaaaaaaatgtataaaaattactgctag
cagtttaataaatcattcctgatgtatgctgagtgaatatttctaaaatc
aatgaaaatgaaattagtttagagttgagggcaaattataattccatttt
aatctggtcacctataaggaagacagagtttagcaatcttaatagtgatt
taggttctgtaactcacagatcattcagttctttggctaaactgtcattt
atcttgtagtgactaatgtttaaaaacaggtctcaaggatagttccactt
aacattagcagtgaaacattactggtctatatgtccagtaagcttgttct
gagagtactatgtttctaattaatatggagggagaacaggaagtcgaggc
acacaaaatatattaaatcatctttgatcacatgaaatgaaaaaaaaaag
actaaaaaagaatctcaagtgagcaaggatatctgaactttggattaatt
tttatgctgaaagggtgatgtctatcccacctcatatatctgaccttcct
tccttgtctctgttatctgatgtttgcattgtcgatgtactgtcatcagt
attttatctttattttgccacacaaaggacatatactatttttaccagta
tttataagtttactacaaaagggtttttaaacagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_20073560_20074639
seq2: B6Ng01-326K06.g_62_1146

seq1  GAATTCTGTGGCATTAGCACGTATAAACAGTATATAGGCTGAGACATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGCATTAGCACGTATAAACAGTATATAGGCTGAGACATAAA  50

seq1  ATTCTTAAAATGTACTACTAAAGGAAACGAAGCCAAGAGGTGAGCTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAAATGTACTACTAAAGGAAACGAAGCCAAGAGGTGAGCTTCAT  100

seq1  TAAACCACCAAGGAGTCATAAATCTTGTCTTTCCATGCTTCTGATAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCACCAAGGAGTCATAAATCTTGTCTTTCCATGCTTCTGATAGACA  150

seq1  TTTGGAGAGCATTGTTTATGTTATTCCTGATGTGACCAATCTTTTTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGAGCATTGTTTATGTTATTCCTGATGTGACCAATCTTTTTTTCC  200

seq1  TCCTCTTTTCTATTTTGTTTGTTTGTTTTTTTCTCTATTGTTTTGTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTTCTATTTTGTTTGTTTGTTTTTTTCTCTATTGTTTTGTCTAC  250

seq1  TTAAAATAATTGTACTACCTATTCCCATGACCTTAGAACTTATGCTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAATTGTACTACCTATTCCCATGACCTTAGAACTTATGCTAGCA  300

seq1  ACTATCCTCAAAAGTGGTTATCTTTTATAGGATTGTTTTCCCCTTTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCCTCAAAAGTGGTTATCTTTTATAGGATTGTTTTCCCCTTTTACT  350

seq1  TAAATTCCATCATCTGTTCCCTGAAAGTGCAGCATCACACCACTGACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCCATCATCTGTTCCCTGAAAGTGCAGCATCACACCACTGACCTT  400

seq1  AAATGAAGACTACTTTGGAAATGAAAAAAATGTATAAAAATTACTGCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGACTACTTTGGAAATGAAAAAAATGTATAAAAATTACTGCTAG  450

seq1  CAGTTTAATAAATCATTCCTGATGTATGCTGAGTGAATATTTCTAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTAATAAATCATTCCTGATGTATGCTGAGTGAATATTTCTAAAATC  500

seq1  AATGAAAATGAAATTAGTTTAGAGTTGAGGGCAAATTATAATTCCATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAATGAAATTAGTTTAGAGTTGAGGGCAAATTATAATTCCATTTT  550

seq1  AATCTGGTCACCTATAAGGAAGACAGAGTTTAGCAATCTTAATAGTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGTCACCTATAAGGAAGACAGAGTTTAGCAATCTTAATAGTGATT  600

seq1  TAGGTTCTGTAACTCACAGATCATTCAGTTCTTTGGCTAAACTGTCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCTGTAACTCACAGATCATTCAGTTCTTTGGCTAAACTGTCATTT  650

seq1  ATCTTGTAGTGACTAATGTTTAAAAACAGGTCTCAAGGATAGTTCCACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTAGTGACTAATGTTTAAAAACAGGTCTCAAGGATAGTTCCACTT  700

seq1  AACATTAGCAGTGAAACATTACTGGTCTATATGTCCAGTAAGCTTGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAGCAGTGAAACATTACTGGTCTATATGTCCAGTAAGCTTGTTCT  750

seq1  GAGAGTACTATGTTTCTAATTAATATGGAGGGAGAACAGGAAGTCGAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTACTATGTTTCTAATTAATATGGAGGGAGAACAGGAAGTCGAGGC  800

seq1  ACACAAAATATATTAAATCATCTTTGATCACATGAAATGAAAAAAAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAATATATTAAATCATCTTTGATCACATGAAATGAAAAAAAAAAG  850

seq1  ACTAAAAAAGAATCTCAAGTGAGCAAGGATATCTGAACTTTGGATTAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAAGAATCTCAAGTGAGCAAGGATATCTGAACTTTGGATTAATT  900

seq1  TTTATGCTGAAAGGGTGATGTCTAT-CCACCTCATATATCTGACCTTCCT  949
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTATGCTGAAAGGGTGATGTCTATCCCACCTCATATATCTGACCTTCCT  950

seq1  TCCTTGTCTCTGTTATCTGATGTTTGCATTGTCGATGTACTGTTCATCAG  999
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCCTTGTCTCTGTTATCTGATGTTTGCATTGTCGATGTACTG-TCATCAG  999

seq1  TATTTTATC-TTATTTTG-CACACAAAGACAATATACTA-TTTTACCAGT  1046
      ||||||||| |||||||| |||||||||   |||||||| ||||||||||
seq2  TATTTTATCTTTATTTTGCCACACAAAGGACATATACTATTTTTACCAGT  1049

seq1  A-TTATTAGTTTACTACAAAAGGG-TTTTAAACAGG  1080
      | |||| ||||||||||||||||| |||||||||||
seq2  ATTTATAAGTTTACTACAAAAGGGTTTTTAAACAGG  1085


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