BAC Information

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BAC

Clone NameB6Ng01-327O19
Chromosome6 (Build37)
Map Location 111,299,119 - 111,300,025
singlet/doubletsinglet
Overlap geneGrm7
Upstream genenone
Downstream gene1700054K19Rik, Lmcd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327O19.bB6Ng01-327O19.g
ACCGA115329GA115330
length1,197902
definitionB6Ng01-327O19.b B6Ng01-327O19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccacctacttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatatttatattatt
tgtgactattgagaaaggtgttgttccctaattctttcttcagcctgttt
attctttgtgtagagaaaggccattgactgttgagttaattttatatcca
agctacttcaccggaagctgttattcagggttaggagttcctctgggtag
aattttaggtcaacttatatatacctatccattcatctgcaaagtgactc
ggacttctctccaattggatgccgtggaactcctcttttgatgtagc
gaattcaagagctgtaggtcattgtgtgtttgtatataagacactgtggg
cagggaactttgtggatctgaggtaatatcaagaggaggaagccacctta
tgggtgtcctgacaaatcgtgcatggctattcagaatgattgaaagccac
gaaaaggcacagaagggattaaaaataggatcccctgatgtgggaacagt
cttcctgcggtgcaagtaaagggcttaggaagtggcactgggaacaagca
tggaagaaatgtaagacagtttagcgaaagatattacaatggcaaaggtg
agaaaagttggtgtcatccattctcctaggcttgggcatcttctgttttg
atttgtcttttcttttgtttggttttatttttggtttgtttgtttgtctg
tttttatgttattgttgtaccagtttagtttctggcaaataaaacagggt
ccaaaactcagtaatgcagcaaatcctcaatatatatgttaaatgtaata
gtaatgaagagctgaactagtctgcttaagaaaggaagttgatatataac
acagaatacactttgagtgtaagtcatattaggaagaagggcctagagac
caagatcaggccttgagaaggtaggacgaactttagactgaacatggtac
aatggacataagagccagacatgtcttacaggcctttaacattcacgcag
aaacatcattgagagtaaaataaactatatatatatatatatatatatat
atatatatatacatacatacatacatatatatatatatacatacatacat
ctatatatagagagagagagagagagacagagacatagacgagagacaca
gacgagactgacagagacagacagacgagacggggtagagagacagagag
ac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_111299119_111300025
seq2: B6Ng01-327O19.g_64_965

seq1  GAATTCAAGAGCTGTAGGTCATTGTGTGTTTGTATATAAGACACTGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGCTGTAGGTCATTGTGTGTTTGTATATAAGACACTGTGGG  50

seq1  CAGGGAACTTTGTGGATCTGAGGTAATATCAAGAGGAGGAAGCCACCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAACTTTGTGGATCTGAGGTAATATCAAGAGGAGGAAGCCACCTTA  100

seq1  TGGGTGTCCTGACAAATCGTGCATGGCTATTCAGAATGATTGAAAGCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTCCTGACAAATCGTGCATGGCTATTCAGAATGATTGAAAGCCAC  150

seq1  GAAAAGGCACAGAAGGGATTAAAAATAGGATCCCCTGATGTGGGAACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCACAGAAGGGATTAAAAATAGGATCCCCTGATGTGGGAACAGT  200

seq1  CTTCCTGCGGTGCAAGTAAAGGGCTTAGGAAGTGGCACTGGGAACAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCGGTGCAAGTAAAGGGCTTAGGAAGTGGCACTGGGAACAAGCA  250

seq1  TGGAAGAAATGTAAGACAGTTTAGCGAAAGATATTACAATGGCAAAGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAATGTAAGACAGTTTAGCGAAAGATATTACAATGGCAAAGGTG  300

seq1  AGAAAAGTTGGTGTCATCCATTCTCCTAGGCTTGGGCATCTTCTGTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTTGGTGTCATCCATTCTCCTAGGCTTGGGCATCTTCTGTTTTG  350

seq1  ATTTGTCTTTTCTTTTGTTTGGTTTTATTTTTGGTTTGTTTGTTTGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTTTTCTTTTGTTTGGTTTTATTTTTGGTTTGTTTGTTTGTCTG  400

seq1  TTTTTATGTTATTGTTGTACCAGTTTAGTTTCTGGCAAATAAAACAGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGTTATTGTTGTACCAGTTTAGTTTCTGGCAAATAAAACAGGGT  450

seq1  CCAAAACTCAGTAATGCAGCAAATCCTCAATATATATGTTAAATGTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACTCAGTAATGCAGCAAATCCTCAATATATATGTTAAATGTAATA  500

seq1  GTAATGAAGAGCTGAACTAGTCTGCTTAAGAAAGGAAGTTGATATATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGAAGAGCTGAACTAGTCTGCTTAAGAAAGGAAGTTGATATATAAC  550

seq1  ACAGAATACACTTTGAGTGTAAGTCATATTAGGAAGAAGGGCCTAGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATACACTTTGAGTGTAAGTCATATTAGGAAGAAGGGCCTAGAGAC  600

seq1  CAAGATCAGGCCTTGAGAAGGTAGGACGAACTTTAGACTGAACATGGTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCAGGCCTTGAGAAGGTAGGACGAACTTTAGACTGAACATGGTAC  650

seq1  AATGGAAATAAGAGCCAGACATGTCTTAAAGGCCTTTAACATTCAGGCAG  700
      |||||| ||||||||||||||||||||| |||||||||||||||| ||||
seq2  AATGGACATAAGAGCCAGACATGTCTTACAGGCCTTTAACATTCACGCAG  700

seq1  AAACATCATTGAGAGTAAAATAAACTATATATATATATATATATATATAT  750
      |||||||||||||||||||||||||    |||||||||||||||||||||
seq2  AAACATCATTGAGAGTAAAATAAAC----TATATATATATATATATATAT  746

seq1  ATATATATATATATACATACATACATACATATATATATATATACATACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATACATACATACATACATATATATATATATACATACAT  796

seq1  ACATATATATATAGAGAGAGAGAGAGAGAGACAGAGACAGAGACAGAGAG  850
      |||| |||||||||||||||||||||||||||||||||| |||| |||||
seq2  ACATCTATATATAGAGAGAGAGAGAGAGAGACAGAGACATAGAC-GAGAG  845

seq1  ACAGAGACGAGACAGAGAGAGACAGACAGACAGAGACAGGG-AGAGAGAC  899
      ||| ||||||||| || |||||||||||||| ||||| ||| ||||||||
seq2  ACACAGACGAGACTGACAGAGACAGACAGAC-GAGACGGGGTAGAGAGAC  894

seq1  AGAGAGAC  907
      ||||||||
seq2  AGAGAGAC  902