BAC Information

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BAC

Clone NameB6Ng01-333J10
Chromosome6 (Build37)
Map Location 99,633,181 - 99,634,343
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665963, LOC665979, Foxp1, Eif4e3
Downstream geneGpr27, Prok2, LOC384466, LOC626503, LOC100043703, Rybp, Shq1, LOC625221
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333J10.bB6Ng01-333J10.g
ACCGA119343GA119344
length1,162211
definitionB6Ng01-333J10.b B6Ng01-333J10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccaaaactataatccctttaataatcaaaatgaaaacatgaga
cttgataaaaattaaaatcccttgctttttcaaatacattaaagaggttt
ccatgacggctcagtgggccaagtgtggtgatctaagtctggtcaccaag
aagcacatggtggaaggttagaaacacctcctgcaagttgtcccctgacc
tgaacacatggcatatgtggcccttggggcatgtgcagcacacatacaaa
caagagtgaatttggtcaaaaacacaataagggacaaaagactcacacaa
tgaaaaaatatgcacacagttttgttttgttttttaacatgaagtgtgtt
tattaggaaaaaccactgctaagattcataagtcgtcctcctgcacttag
tcctaggccaggaatatccagtgactgcccagggaaagaacaccatgttc
tttcggttttgcctacggaaaaggaactttatggcagttcaatgtcaaga
catgaaagctacatctatgatataaagtagcatctaaaaccacggtggct
tcaagagttgccaactctcaaaaaacaaaacaaaacaaaacaacaaaaca
aaacaaaacaataatggatacacagcctgctaaaaaatatgggcaaaaac
tggacaagctcatcagtaaaggatatatagaaatggcaggtgagcatctg
aaaaattgcctgtattgattattcccagtctagtagatctctgtcagcta
tgctgttgggtacaaaagcaaactacaccatttccagatgtctaaaatct
taacctgcagacctccaaagcatctttctcagtactctactggcatctac
agagcatacgaataaggagctaatgggaaaaaagaaagatgtgagctctg
ctttatgggagtgctgacacacagtaggggtacagacacacagtaggggt
acagaatgctatgggaaggaatgagggcacagctgagcagagagcagtca
gactagacagggtatggaaagggggagtggggagcatttggaggcgttct
gagaggcgatgaagcttaggactgtatcaggcctcgcggtgatcttaagg
taggtcatgcagacacaagccaaagcaccttcagtggtctgaatagttct
acactgttcccc

gaattcagaaggaactaggaaagggtgacgttttttcagcagcaagtctc
agaggctaaaaacattctagatctagattagatagtacagaggctaaaag
cttccagtactaggcctagcttagcagacagtggcaattactacaggaga
ataaaagttacttttacaatagggagtggcactattaggaagtgtggctt
tgttggagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_99633181_99634343
seq2: B6Ng01-333J10.b_47_1208

seq1  GAATTCACCAAAACTATAATCCCTTTAATAATCAAAATGAAAACATGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAAAACTATAATCCCTTTAATAATCAAAATGAAAACATGAGA  50

seq1  CTTGATAAAAATTAAAATCCCTTGCTTTTTCAAATACATTAAAGAGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAAAAATTAAAATCCCTTGCTTTTTCAAATACATTAAAGAGGTTT  100

seq1  CCATGACGGCTCAGTGGGCCAAGTGTGGTGATCTAAGTCTGGTCACCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACGGCTCAGTGGGCCAAGTGTGGTGATCTAAGTCTGGTCACCAAG  150

seq1  AAGCACATGGTGGAAGGTTAGAAACACCTCCTGCAAGTTGTCCCCTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATGGTGGAAGGTTAGAAACACCTCCTGCAAGTTGTCCCCTGACC  200

seq1  TGAACACATGGCATATGTGGCCCTTGGGGCATGTGCAGCACACATACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACATGGCATATGTGGCCCTTGGGGCATGTGCAGCACACATACAAA  250

seq1  CAAGAGTGAATTTGGTCAAAAACACAATAAGGGACAAAAGACTCACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGAATTTGGTCAAAAACACAATAAGGGACAAAAGACTCACACAA  300

seq1  TGAAAAAATATGCACACAGTTTTGTTTTGTTTTTTAACATGAAGTGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAATATGCACACAGTTTTGTTTTGTTTTTTAACATGAAGTGTGTT  350

seq1  TATTAGGAAAAACCACTGCTAAGATTCATAAGTCGTCCTCCTGCACTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGAAAAACCACTGCTAAGATTCATAAGTCGTCCTCCTGCACTTAG  400

seq1  TCCTAGGCCAGGAATATCCAGTGACTGCCCAGGGAAAGAACACCATGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGCCAGGAATATCCAGTGACTGCCCAGGGAAAGAACACCATGTTC  450

seq1  TTTCGGTTTTGCCTACGGAAAAGGAACTTTATGGCAGTTCAATGTCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGTTTTGCCTACGGAAAAGGAACTTTATGGCAGTTCAATGTCAAGA  500

seq1  CATGAAAGCTACATCTATGATATAAAGTAGCATCTAAAACCACGGTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGCTACATCTATGATATAAAGTAGCATCTAAAACCACGGTGGCT  550

seq1  TCAAGAGTTGCCAACTCTCAAAAAACAAAACAAAACAAAACAACAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGTTGCCAACTCTCAAAAAACAAAACAAAACAAAACAACAAAACA  600

seq1  AAACAAAACAATAATGGATACACAGCCTGCTAAAAAATATGGGCAAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAATAATGGATACACAGCCTGCTAAAAAATATGGGCAAAAAC  650

seq1  TGGACAAGCTCATCAGTAAAGGATATATAGAAATGGCAGGTGAGCATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAGCTCATCAGTAAAGGATATATAGAAATGGCAGGTGAGCATCTG  700

seq1  AAAAATTGCCTGTATTGATTATTCCCAGTCTAGTAGATCTCTGTCAGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGCCTGTATTGATTATTCCCAGTCTAGTAGATCTCTGTCAGCTA  750

seq1  TGCTGTTGGGTACAAAAGCAAACTACACCATTTCCAGATGTCTAAAATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGGGTACAAAAGCAAACTACACCATTTCCAGATGTCTAAAATCT  800

seq1  TAACCTGCAGACCTCCAAAGCATCTTTCTCAGTACTCTACTGGCATCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGCAGACCTCCAAAGCATCTTTCTCAGTACTCTACTGGCATCTAC  850

seq1  AGAGCATACGAATAAGGAGCTAATGGGAAAAAAGAAAGATGTGAGCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATACGAATAAGGAGCTAATGGGAAAAAAGAAAGATGTGAGCTCTG  900

seq1  CTTTATGGGAGTGCTGACACACAGTAGGGGGTACAGACACACAGTAGGGG  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTTATGGGAGTGCTGACACACAGTA-GGGGTACAGACACACAGTAGGGG  949

seq1  TACAGAATGCTAT-GGAAGGAATGAGGGCACAGCTGAGCAGAGAGCAGTC  999
      ||||||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  TACAGAATGCTATGGGAAGGAATGAGGGCACAGCTGAGCAGAGAGCAGT-  998

seq1  CAGACTAGACAAGGGTAATGGAA--GGGGAGT-GGGAGCATTTGGAGGCG  1046
      |||||||||| ||||| ||||||  ||||||| |||||||||||||||||
seq2  CAGACTAGAC-AGGGT-ATGGAAAGGGGGAGTGGGGAGCATTTGGAGGCG  1046

seq1  TTCTGAGAGGCGATGAAGCTTAGGGACTGTAATCAGGCCTCGC-GTGATC  1095
      |||||||||||||||||||||| ||||||| |||||||||||| ||||||
seq2  TTCTGAGAGGCGATGAAGCTTA-GGACTGT-ATCAGGCCTCGCGGTGATC  1094

seq1  TT-AGGTAGGTCATGCAGACACAAGCCAAAGCACCTTCAGTGGCCTGAGT  1144
      || |||||||||||||||||||||||||||||||||||||||| |||| |
seq2  TTAAGGTAGGTCATGCAGACACAAGCCAAAGCACCTTCAGTGGTCTGAAT  1144

seq1  ATGTCCTACACTGTTCCCC  1163
      | || ||||||||||||||
seq2  A-GTTCTACACTGTTCCCC  1162


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