BAC Information

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BAC

Clone NameB6Ng01-335B24
Chromosome6 (Build37)
Map Location 109,505,486 - 109,506,584
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC677205, Bhlhb2, Arl8b, Edem1, EG627371, LOC639110, LOC100043720
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335B24.bB6Ng01-335B24.g
ACCGA120449GA120450
length1,0881,072
definitionB6Ng01-335B24.b B6Ng01-335B24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagcataaatttttaacatactcattatgctatccatgtttt
ccttcagaagaagaaagaatctggtaattttggtgaaggaatcagaattg
gggctacagaaataacacaaaggaatcagagcttggccacttgatttaat
tttcctctttaaaatgataaatgtaaaagtaagtaagatctaactttttc
tccctttctggcacactgtacttcaaatctaataccagttagattttctt
attcatatgtcatgggagaagagaaccttggggtggaaggaaatacatac
agtcttccatctatgagatgccctagggcaaagaagtttatgaaaatctt
catagcatcttatcaaatagagttaaactgctacccaggagctgtagtct
gccattatgttagtcctatggcttgacagtattgatgcttgttatcttaa
cacttgtattatctgtcagagattttagttacatatgcctgaatcacaaa
ttttatgttctttatatcttatttcaatcttgggttacataccttcatat
tacattggtctggtagatgttcaaagccttagtaggaccaaagtacaaaa
ttaggaaagatacattggttgcttgagaagctgcttcaagtattagtgcc
atgcattgttgatctgaaaatattttatcagagtaaaggctgctattttg
ttgtatatatttggcctcttctcttgacccactgttttgtgctagagaag
ttgcttcctaggtcttagcacatttaactattgtcgttggaactagaaag
tcatttaagaaagaaatatttgtgtaataaggaattgaatgtgaatattt
tgcactattttcatgagcaacctgttagtcaaatgacacctcttcatgag
atttctcaaggtagatcttcctctagagtagtagttcttaatttccttaa
tgctgtggtctttatgtagctccttatatgtggtggcccccaccataaat
atttctgtgtattcataactgaaatttgcttactattatgaatataatgt
aaatatctgatatcaggatatctggaatgccaaccccc

gaattctctgtttagttctatatcccatttttttgattgtgttgtttggt
cttttggtggttaacttattgagttctttatatattttggatattagccc
tctatcagatgtgggttagtgaaggttttttttcccaaccactaggttgc
tgatatgtcttattgactatgccctttgccttacagaagctttccagttt
tatggggtcccatttatcaattgttggtcttagagcatgagctattggag
ttctgtttagaaaatttccccctgtaccaatgagctcaaggctctttcac
tctttctcttctattagattcagtgtgtctggttttatattgagtccttg
atccacttagacttgagctttgtgcaaggtgacaaatatgggtctatttt
catttttctacatacagaaaacaagctagaccagcaccatcatttgaaga
tgctttttttccaatgtatatttttagcttctttgtcaaagatcaagtgt
gagtaagtgtatggttttatttctctgtcttaagtgttattccattgatc
aacttgtctgtctctgtaccaataccatgcagttgttgttgttgtttttt
tatcactattgctctgtagtaaatcttaaggtcagggatggtgatttccc
cagtcgttcttttattgttaagaattggttttgcttattttttcctttca
agattaatttgagaaattgctctttccatgtctttaattaattgtgttgg
gattttggtaagttttgcaggcaaatagaaggaactatcatcatgaatga
gataaatcagaccaaaaggacatgcatgaactgcagggatgagaagggag
aggaacctgaggaaaagaaggttctgccacaggctcaaagtggaattcca
gctcaacaggaggtcccaaagcctgacactattactgaagctatggagca
ctcacaaaagatacccatcatgactgccctccagaagaacccaaagagcc
ggctgtaagagtcagggtgcatattgagcattctttcgggttatgtgctc
cataaggtgttaatgcctgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109505486_109506584
seq2: B6Ng01-335B24.b_46_1133

seq1  GAATTCTTTAGCATAAATTTTTAACATACTCATTATGCTATCCATGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGCATAAATTTTTAACATACTCATTATGCTATCCATGTTTT  50

seq1  CCTTCAGAAGAAGAAAGAATCTGGTAATTTTGGTGAAGGAATCAGAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAAGAAGAAAGAATCTGGTAATTTTGGTGAAGGAATCAGAATTG  100

seq1  GGGCTACAGAAATAACACAAAGGAATCAGAGCTTGGCCACTTGATTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACAGAAATAACACAAAGGAATCAGAGCTTGGCCACTTGATTTAAT  150

seq1  TTTCCTCTTTAAAATGATAAATGTAAAAGTAAGTAAGATCTAACTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTTAAAATGATAAATGTAAAAGTAAGTAAGATCTAACTTTTTC  200

seq1  TCCCTTTCTGGCACACTGTACTTCAAATCTAATACCAGTTAGATTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCTGGCACACTGTACTTCAAATCTAATACCAGTTAGATTTTCTT  250

seq1  ATTCATATGTCATGGGAGAAGAGAACCTTGGGGTGGAAGGAAATACATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATGTCATGGGAGAAGAGAACCTTGGGGTGGAAGGAAATACATAC  300

seq1  AGTCTTCCATCTATGAGATGCCCTAGGGCAAAGAAGTTTATGAAAATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCATCTATGAGATGCCCTAGGGCAAAGAAGTTTATGAAAATCTT  350

seq1  CATAGCATCTTATCAAATAGAGTTAAACTGCTACCCAGGAGCTGTAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATCTTATCAAATAGAGTTAAACTGCTACCCAGGAGCTGTAGTCT  400

seq1  GCCATTATGTTAGTCCTATGGCTTGACAGTATTGATGCTTGTTATCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTATGTTAGTCCTATGGCTTGACAGTATTGATGCTTGTTATCTTAA  450

seq1  CACTTGTATTATCTGTCAGAGATTTTAGTTACATATGCCTGAATCACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTATTATCTGTCAGAGATTTTAGTTACATATGCCTGAATCACAAA  500

seq1  TTTTATGTTCTTTATATCTTATTTCAATCTTGGGTTACATACCTTCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTTCTTTATATCTTATTTCAATCTTGGGTTACATACCTTCATAT  550

seq1  TACATTGGTCTGGTAGATGTTCAAAGCCTTAGTAGGACCAAAGTACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGGTCTGGTAGATGTTCAAAGCCTTAGTAGGACCAAAGTACAAAA  600

seq1  TTAGGAAAGATACATTGGTTGCTTGAGAAGCTGCTTCAAGTATTAGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAAGATACATTGGTTGCTTGAGAAGCTGCTTCAAGTATTAGTGCC  650

seq1  ATGCATTGTTGATCTGAAAATATTTTATCAGAGTAAAGGCTGCTATTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTGTTGATCTGAAAATATTTTATCAGAGTAAAGGCTGCTATTTTG  700

seq1  TTGTATATATTTGGCCTCTTCTCTTGACCCACTGTTTTGTGCTAGAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATATTTGGCCTCTTCTCTTGACCCACTGTTTTGTGCTAGAGAAG  750

seq1  TTGCTTCCTAGGTCTTAGCACATTTAACTATTGTCGTTGGAACTAGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCTAGGTCTTAGCACATTTAACTATTGTCGTTGGAACTAGAAAG  800

seq1  TCATTTAAGAAAGAAATATTTGTGTAATAAGGAATTGAATGTGAATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAGAAAGAAATATTTGTGTAATAAGGAATTGAATGTGAATATTT  850

seq1  TGCACTATTTTCATGAGCAACCTGTTAGTCAAATGACACCTCTTCATGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTATTTTCATGAGCAACCTGTTAGTCAAATGACACCTCTTCATGAG  900

seq1  ATTTCTCAAGGTAGATCTTCCTCTAGAGTAGTAGTTCTTAATTTCCTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAAGGTAGATCTTCCTCTAGAGTAGTAGTTCTTAATTTCCTTAA  950

seq1  TGCTGTGGTTCTTTTATGTAGCTCCTTATATTGTGGTGGCCCCCAACCAT  1000
      |||||||||   |||||||||||||||||| ||||||||||||| |||||
seq2  TGCTGTGGT--CTTTATGTAGCTCCTTATA-TGTGGTGGCCCCC-ACCAT  996

seq1  AAAATTATTTCTGTTGTTATTTCATAACTGAAATTTTGCTACTATTATGA  1050
      |||  |||||||| |||   ||||||||||||||||   |||||||||||
seq2  AAA--TATTTCTG-TGT--ATTCATAACTGAAATTTGCTTACTATTATGA  1041

seq1  ATTATAATGTAAATATCTGATATCCAGGATATCTGATAGGCAAACCCCC  1099
      | ||||||||||||||||||||| |||||||||||  | || |||||||
seq2  A-TATAATGTAAATATCTGATAT-CAGGATATCTGGAATGCCAACCCCC  1088


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