BAC Information

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BAC

Clone NameB6Ng01-335M14
Chromosome6 (Build37)
Map Location 141,413,896 - 141,415,024
singlet/doubletsinglet
Overlap genePde3a
Upstream genePlekha5, Aebp2, EG664868, LOC664875
Downstream geneSlco1c1, Slco1b2, EG435927, Slco1a4, LOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335M14.bB6Ng01-335M14.g
ACCGA120901GA120902
length1,1851,137
definitionB6Ng01-335M14.b B6Ng01-335M14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaaatgagtgcacaatatacccaaactgaggagccacgat
gaaagcagtgctaagagaaaagttcatagcattaagtaacttcataaaga
aagagagagatctcatactggcaacttaacagtgtaccggaaagctctag
aataaaaagaagcaagcacagccaagatcagtagatgacaagaaataatc
aaacttaggactgaaatcaataaaatagcaacaaagaatcaattaaaaca
aagtgttgtgtatttctagaaaatcaatgagctagataaatccttatcca
aactaactaaaatgcagaaagagaaaattcaaattaacaaaatcagaaag
aaaaacagagacatatcaataggcaccaaggaaatctgaagaatcgttag
gtcatactttagaaacctgtactccacaaaattgaaagttctaaaagaaa
tggacaaatttcttgatagattccacttaccaaagttaatcaagatcaga
taaaccatttaaatagcctataatacctaagaaagtagaagcagtcatta
aaagtctctcccaactccctcacaaatcaaaaacgccccccaggctagaa
ttctaccagactttcaaagaagaacaaataccaataattatcagatgttt
ttacaaaatagaaatagaaggaacattgccaaattcattttatgaagtca
caatcactatgatcgccaaaccacacaaagattcaccaaagaattacaga
caaattttcctcatgaaattgttgtaaatacacttaataaaattcttata
aactgagcccaagagcacaacaaaaatgtcaaccaccatgatcaagtagg
tttcattccagagacacactgatggttaaacatgaaaatctaccaatgta
atccatcatataaacaaaattaaagaaaaacaaatgcatgatcatctcat
tagatgctaaaaaaccctttgacaaaaaatccaacaccctttcataataa
gcactagaatatatcagtaatacaaaacgtattaaggcaataatacagca
gctgatagccaacatcaattaaataaataaaaaagcactctatttaaatg
aacagacagactgtcccactattctcgatcgatcaaatagtaactgagtc
tgcaataaaccaataggaccacccttaaaaatcga
gaattcccttatctcccaaattagggtggataatgtttccatttccacaa
gtaagacttgaagtgatatataaaaagatatttcacttggaagatttcca
ggaatcccatctcattaattacatggcttctgtaaccttctctaggtcca
atcctctctggattgattgattccaaattagtttacatggaacaacttga
tgaccaagtctgtcatggtcttcatatgctttacctagataaagagaact
cggtacctctaccacaattgatgggatcagtgtgctagcatcatgttcac
tgtgagggtgtttcaattgggctgtacctgggtatcacattctttttagt
gtgttaccaggagaaagaaatcttaggatgctgctataggttgctgctaa
cagtttgtttgttagtttttttttgttttgttttgtttttttttgttttg
ttttgtttttggttaggcaaggctgtgttgccaacaaagtgaaatgacag
gcataggtctgctttcattttctacttgataagtaagttctgcaagacat
tgtcattgagtggcctgattaaatgctaactgttgaatgtatttataaaa
aatattgcataggaaagaatacccatcagcaacctgggaatggatactca
ggttggcatatctgctgtggaggtggtggaaaggtgctggaaagatgtgc
aatgagcaatgtctctgagatctttaactgctgtctttgtagtgctgtca
atcctgactcttggaatgccccagggttgacgactctcaccaaaagcaga
tccttcacttcatcctatgctgtctctgcagctaaccatgtaaaagctaa
aaagcaaaacaggccaggtaagtaacatttctttgcacactctgggtctg
acgtcccattttccatacataagttgtgataatgaactgtgactgtaagt
gaaaacatgaagtttagttggaaaagtggaaagaatgggagattcaccct
cagttcaacgtacaggttcatgctgggattttgtggatttgaccttggtg
agatatacaatttatgattcttagcatttaagatgcttgatgcaagaata
aaagagctcaaggccctaagaaccttggaaagttaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_141413896_141415024
seq2: B6Ng01-335M14.g_69_1205

seq1  GAATTCCCTTATCTCCCAAATTAGGGTGGATAATGTTTCCATTTCCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTATCTCCCAAATTAGGGTGGATAATGTTTCCATTTCCACAA  50

seq1  GTAAGACTTGAAGTGATATATAAAAAGATATTTCACTTGGAAGATTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACTTGAAGTGATATATAAAAAGATATTTCACTTGGAAGATTTCCA  100

seq1  GGAATCCCATCTCATTAATTACATGGCTTCTGTAACCTTCTCTAGGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCCATCTCATTAATTACATGGCTTCTGTAACCTTCTCTAGGTCCA  150

seq1  ATCCTCTCTGGATTGATTGATTCCAAATTAGTTTACATGGAACAACTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTCTGGATTGATTGATTCCAAATTAGTTTACATGGAACAACTTGA  200

seq1  TGACCAAGTCTGTCATGGTCTTCATATGCTTTACCTAGATAAAGAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAGTCTGTCATGGTCTTCATATGCTTTACCTAGATAAAGAGAACT  250

seq1  CGGTACCTCTACCACAATTGATGGGATCAGTGTGCTAGCATCATGTTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTACCTCTACCACAATTGATGGGATCAGTGTGCTAGCATCATGTTCAC  300

seq1  TGTGAGGGTGTTTCAATTGGGCTGTACCTGGGTATCACATTCTTTTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGGTGTTTCAATTGGGCTGTACCTGGGTATCACATTCTTTTTAGT  350

seq1  GTGTTACCAGGAGAAAGAAATCTTAGGATGCTGCTATAGGTTGCTGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACCAGGAGAAAGAAATCTTAGGATGCTGCTATAGGTTGCTGCTAA  400

seq1  CAGTTTGTTTGTTAGTTTTTTTTTGTTTTGTTTTGTTTTTTTTTGTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGTTTGTTAGTTTTTTTTTGTTTTGTTTTGTTTTTTTTTGTTTTG  450

seq1  TTTTGTTTTTGGTTAGGCAAGGCTGTGTTGCCAACAAAGTGAAATGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTGGTTAGGCAAGGCTGTGTTGCCAACAAAGTGAAATGACAG  500

seq1  GCATAGGTCTGCTTTCATTTTCTACTTGATAAGTAAGTTCTGCAAGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTCTGCTTTCATTTTCTACTTGATAAGTAAGTTCTGCAAGACAT  550

seq1  TGTCATTGAGTGGCCTGATTAAATGCTAACTGTTGAATGTATTTATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTGAGTGGCCTGATTAAATGCTAACTGTTGAATGTATTTATAAAA  600

seq1  AATATTGCATAGGAAAGAATACCCATCAGCAACCTGGGAATGGATACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGCATAGGAAAGAATACCCATCAGCAACCTGGGAATGGATACTCA  650

seq1  GGTTGGCATATCTGCTGTGGAGGTGGTGGAAAGGTGCTGGAAAGATGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCATATCTGCTGTGGAGGTGGTGGAAAGGTGCTGGAAAGATGTGC  700

seq1  AATGAGCAATGTCTCTGAGATCTTTAACTGCTGTCTTTGTAGTGCTGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCAATGTCTCTGAGATCTTTAACTGCTGTCTTTGTAGTGCTGTCA  750

seq1  ATCCTGACTCTTGGAATGCCCCAGGGTTGACGACTCTCACCAAAAGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGACTCTTGGAATGCCCCAGGGTTGACGACTCTCACCAAAAGCAGA  800

seq1  TCCTTCACTTCATCCTATGCTGTCTCTGCAGCTAACCATGTAAAAGCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACTTCATCCTATGCTGTCTCTGCAGCTAACCATGTAAAAGCTAA  850

seq1  AAAGCAAAACAGGCCAGGTAAGTAACA-TTCTTTGCACACTCTGGGTCTG  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAAGCAAAACAGGCCAGGTAAGTAACATTTCTTTGCACACTCTGGGTCTG  900

seq1  ACGTCCCATTTTCCATACATAAGTTGTGATAATGAACTGTGACTGTAAAG  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACGTCCCATTTTCCATACATAAGTTGTGATAATGAACTGTGACTGT-AAG  949

seq1  TGAAAAACAATGAAGTTTAAGTTGGAAAAGTGGAAAGAATGGGAGATTCA  999
      ||||||   ||||||||| |||||||||||||||||||||||||||||||
seq2  TGAAAA--CATGAAGTTT-AGTTGGAAAAGTGGAAAGAATGGGAGATTCA  996

seq1  -CCTCAG-TCAACGTACAGGTTCATGCTGGGA-TCTGT-GAATTGAGCTT  1045
       |||||| |||||||||||||||||||||||| | ||| || |||| |||
seq2  CCCTCAGTTCAACGTACAGGTTCATGCTGGGATTTTGTGGATTTGACCTT  1046

seq1  GGTGAG--ATACAA-TTATGATTC-TAGCATTTAAGATGC-TGATGCAGG  1090
      ||||||  |||||| ||||||||| ||||||||||||||| ||||||| |
seq2  GGTGAGATATACAATTTATGATTCTTAGCATTTAAGATGCTTGATGCAAG  1096

seq1  AATAAAAGAGCTCAAGGCCTTAGGAGC--TGGAAAGTTAAC  1129
      ||||||||||||||||||| || || |  ||||||||||||
seq2  AATAAAAGAGCTCAAGGCCCTAAGAACCTTGGAAAGTTAAC  1137