BAC Information

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BAC

Clone NameB6Ng01-335O10
Chromosome6 (Build37)
Map Location 7,094,592 - 7,095,603
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc25a13, EG667462, EG667468, LOC667471, LOC100040096, Shfm1, LOC545826, Dlx6as, Dlx5, Acn9
Downstream geneEG667500, Tac1, LOC667511, Asns, EG667529, C1galt1, LOC100040661, Col28a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335O10.g
ACCGA120984
length1,030
definitionB6Ng01-335O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagctggtggctggtccttcctagctttctcctcttcccctgcgg
gacagcccctgtaactcctaggaaactccccgtgtggcttaccctctctg
caaacttcctagcttacacctccctgtgtttcctctgtgcttctgtgttt
ctgatagaacaggattacagggattggcattcacgggaagacgtgcaaag
gaacatcattcactcaaagcaccgagctatggatgcaatgatttttttca
gagctattgagatacaggtcttaaaatgtggtgaattttcaaatctatca
ttctccgaaagggtcgtggttttgtaaaactaaggaacgtgacagaaatt
gaaaaaccaatgtgaggtcaaaattcttcatttaaaaaaaaaaggagttt
tcacaaaagctaccttgattgtcttagtttttaagggtatttctactgcc
agacttgggtcatgaaaggaaagttttatataacagtgggcaagtttagt
ttgcagctatatacatttaacaacacatcatattttaaatccagactatt
ttcttaaaggcctctgatattttctaaaagatcacatttccaaattactt
ttagctcaggggatgttttttttttttccctatcaattatgcttgacatg
tgatatcgtagtttcttatggaatctcaataaatctctcgtcttttctct
atcaatgacccgagctctcatacagtgagctaaaagcaagatagattgag
aacggcgagattgaataacgcaggggaaaagggataatgaaagcgtgggt
ttctgctcctctggcccaaattgagtcattgtttttcaagatgactgtca
ttcagggctctcttccactttttcttcgcgagttctaatttacagtggtg
actggttctcagggattttggctactattgaccaattgcttaaaatactg
atcattacactcattcagttggcttttgtcaaggaccatttcattgctag
gattccatcaactcgaatagacatcctttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_7094592_7095603
seq2: B6Ng01-335O10.g_66_1095 (reverse)

seq1  CAAAGGATGTCTAT--CAGTTGCTGGA--TCTAG-AAAAAAATGGTCCTT  45
      ||||||||||||||   ||||| ||||   |||| ||  |||||||||||
seq2  CAAAGGATGTCTATTCGAGTTGATGGAATCCTAGCAATGAAATGGTCCTT  50

seq1  TAAAAAATAAAATTGAA-GGTTCTAATGATCA-TATTTAAA--AATTTG-  90
       | ||||   || |||| |  | ||||||||| ||||| ||  |||| | 
seq2  GACAAAAGCCAACTGAATGAGTGTAATGATCAGTATTTTAAGCAATTGGT  100

seq1  AAATAGTAGCC-AAATCCCTGAGAACAAATCCCCA-TGGAAA-TAGAACT  137
       |||||||||| |||||||||||||| | || ||| || ||| |||||||
seq2  CAATAGTAGCCAAAATCCCTGAGAACCAGTCACCACTGTAAATTAGAACT  150

seq1  TG-GGAGGGAAAGTGG-AGAGTGCCTTGAATGATGCTTATTTTAAAAAAC  185
       | | ||  ||||||| |||| ||| |||||||   | || || ||||||
seq2  CGCGAAGAAAAAGTGGAAGAGAGCCCTGAATGACAGTCATCTTGAAAAAC  200

seq1  AATGACTC-ATTTGGGACAGAGGAGCAGAAACCCACTGTTCCATTATCCC  234
      |||||||| ||||||| |||||||||||||||||||  || |||||||||
seq2  AATGACTCAATTTGGGCCAGAGGAGCAGAAACCCACGCTTTCATTATCCC  250

seq1  -TTTCCCCTGCTTTATTCATTCTTGCCTTTCTCAATCTATCTTGCTTTTC  283
       |||||||||| ||||||| ||| ||| ||||||||||||||||||||| 
seq2  TTTTCCCCTGCGTTATTCAATCTCGCCGTTCTCAATCTATCTTGCTTTTA  300

seq1  ACTC-CTGTATTTGAGCTCGGGTTATTGATAGAGAAAAGATGAAAGATTT  332
       ||| ||||||  |||||||||| |||||||||||||||| || ||||||
seq2  GCTCACTGTATGAGAGCTCGGGTCATTGATAGAGAAAAGACGAGAGATTT  350

seq1  ATTAAGCTACCATAAGAAACAACTTTTTCAAATGCCAAGCAAAATTGATA  382
      ||| || | ||||||||||| ||  | ||| ||| |||||| ||||||||
seq2  ATTGAGATTCCATAAGAAACTACGATATCACATGTCAAGCATAATTGATA  400

seq1  GGGAAAAAAAAAAAACATCCCCTGAGCTAAAAGTAATTTGGAAATGTGAT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAAAAAAAACATCCCCTGAGCTAAAAGTAATTTGGAAATGTGAT  450

seq1  CTTTTAGAAAATATCAGAGGCCTTTAAGAAAATAGGCTGGATTTAAAATA  482
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTTTAGAAAATATCAGAGGCCTTTAAGAAAATAGTCTGGATTTAAAATA  500

seq1  TGATTTGTTGTTAAATGTATATAGCTGCAAACTAAACTTGCCCACTGTTA  532
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGTTGTTAAATGTATATAGCTGCAAACTAAACTTGCCCACTGTTA  550

seq1  TATAAAACTTTCCTTTCATGACCCAAGTCTGGCAGTAGAAATACCCTTAA  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACTTTCCTTTCATGACCCAAGTCTGGCAGTAGAAATACCCTTAA  600

seq1  AAACTAAGACAATCAAGGTAGCTTTTGTGAAAACTCCTTTTTTTTTTAAA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGACAATCAAGGTAGCTTTTGTGAAAACTCCTTTTTTTTTTAAA  650

seq1  TGATGAATTTTGACCTCACATTGGTTTTTCAATTTCTGTCACGTTCCTTA  682
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATTTTGACCTCACATTGGTTTTTCAATTTCTGTCACGTTCCTTA  700

seq1  GTTTTACAAAACCACGACCCTTTCGGAGAATGATAGATTTGAAAATTCAC  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAAAACCACGACCCTTTCGGAGAATGATAGATTTGAAAATTCAC  750

seq1  CACATTTTAAGACCTGTATCTCAATAGCTCTGAAAAAAATCACTGCATCC  782
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACATTTTAAGACCTGTATCTCAATAGCTCTGAAAAAAATCATTGCATCC  800

seq1  ATAGCTCACTGCTTTGAGTGAATGATGTTCCTTTGCACGTCTTCCCGTGA  832
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCGGTGCTTTGAGTGAATGATGTTCCTTTGCACGTCTTCCCGTGA  850

seq1  ATGCCAATCCCTGTAATCCTGTTCTATCAGAAACACAGAAGCACAGAGGA  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATCCCTGTAATCCTGTTCTATCAGAAACACAGAAGCACAGAGGA  900

seq1  AACACAGGGAGGTGTAAGCTAGGAAGTTTACAGCGAGGCTAAGCCACACG  932
      ||||||||||||||||||||||||||||| ||| |||| |||||||||||
seq2  AACACAGGGAGGTGTAAGCTAGGAAGTTTGCAGAGAGGGTAAGCCACACG  950

seq1  GGGAGTTTCCTAGGAGTTACAGGGGCTGTCCCACAGGGGAAGAGGAGAAA  982
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGGAGTTTCCTAGGAGTTACAGGGGCTGTCCCGCAGGGGAAGAGGAGAAA  1000

seq1  GCTAGGAAGGACCAGCCACCAGCTGAATTC  1012
      ||||||||||||||||||||||||||||||
seq2  GCTAGGAAGGACCAGCCACCAGCTGAATTC  1030