BAC Information

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BAC

Clone NameB6Ng01-339O17
Chromosome6 (Build37)
Map Location 19,985,874 - 19,986,954
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339O17.bB6Ng01-339O17.g
ACCGA123782GA123783
length1,0861,142
definitionB6Ng01-339O17.b B6Ng01-339O17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcttcaaagacctaaagttcttatcatacagatctttcattt
gcttagagtcacactaaggtatttttatattatttgtgactattgtgaag
ggtgttgtttccctaagttcttgctcagcctgtttatcctttgtgtagag
aaaggccactgatttgtttgagttaattttaaatccagctactcccttca
agttgtttatcaggtttagaagtaataaaaaaaaaatacaaagaacgtat
gaatgaattttcatgtatgtgtttttactccaaagaaagaaaaggtaaat
aaagagattaaaatatttgaaaaagaatcctacatattttgagaatgttt
ctacattaaatataaatatctgaaaaatagtaataaatcaagtgtaaaat
aacatgtgaaataacaaatgcagattatttacattaaagtagtgagacat
gctaggaacaattaaagataagctcattctacaagttacctttcaaaacc
tgttataatttctagattatagttttcaaatatcatatctgtattatttc
aagggagtgaattatagagcataaagaaaaaaaatatatatatgttacag
ttattcttaggtctatgtctggatgcttctagactccatatactctaatc
ttctaagctgactgtttcaaactggcttctctcaggttctgactgaattt
gtctacttgacctcaaaataattcttacaatctgttctaaccttctgttc
cattctcattttctagcttgttttcaattgacctgtaccacctgtctctg
tgaaactgtcccattaaatctctcttcccctctctctctctctctctctc
tgcctctctctctctgtctctctctctctctctctctccctctcaccctc
tctgctgctgctgctctcaagaatttttctctctttcctttgtttttcta
ttaagtagcttttcccttcccatagtctcagattgaaatacctttctccg
acctatactgccaacttcttttctttgactaatcattttatctgtggcct
ccagttagaatataaccttcaaccatagctgtttct

gaattcaatacacatataaaagatacaattagcttgtccgagagatgaag
agattaaagatgaagagattaaaaaagaaaaccattaaatgtaacgacca
cacaaacaggtcttcacaacccagcttttcagttcattacatatagtaaa
ccccgttgaaaaattcaatatccactcatggtaaaagtcctagaaagaat
aagaatacaaaggacataattaacataataaagaaaatctacagaaagcc
caaagcctacactacactaaatgtagaaaaatttaatgcatttccactaa
aattaggaataagacaaagatgtctactttctctctgttttatatatatg
agtatatatacaaatatatgatgatcatactacatatattcttagtagaa
tatattttacatactaaaatatatttacatatgtatcttaaggcatagaa
aaagaaattgaaataagagaagatatgtttagatctccaatgctttttaa
tgtgttgtttttattatttttgattttttgatttttttacactccatatt
ttattccctcccacccctgtccaccctataactgttctatatctcatacc
tcctcccggcccacctgcctccacgaggatgtccccccaccccctcccaa
tctgacctctaaactccctggaacatccagtctcttgagggttaagtgca
tcatctctgaatgaacacaggcccagaagtactctactatgttttggggg
cctcctatcagctggagtgtgctgcctgtttggtggtccagtgtttgaga
gatctcgggagtccaggttaaatgaaactgctggtcctcctacaggattg
cccctctcctcagcttctttaagccttccctaattcaacaacaggtatca
gctgcttctgtccattgattggggtggaaatatctgcatctgtctctttc
agctgcatgttgggctcttcccagtactgtctgcttggtcccccttggtg
gagtgctccatagtctcaataatagtgtcagctgggatctccccttgagc
tgatccacttgggctggtgctgacattttcctctctcattcatcttagtc
atgcagtcatcgtgtcgagtacctcacctcagggagtgataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19985874_19986954
seq2: B6Ng01-339O17.b_48_1133

seq1  GAATTCTTTCTTCAAAGACCTAAAGTTCTTATCATACAGATCTTTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCAAAGACCTAAAGTTCTTATCATACAGATCTTTCATTT  50

seq1  GCTTAGAGTCACACTAAGGTATTTTTATATTATTTGTGACTATTGTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAGTCACACTAAGGTATTTTTATATTATTTGTGACTATTGTGAAG  100

seq1  GGTGTTGTTTCCCTAAGTTCTTGCTCAGCCTGTTTATCCTTTGTGTAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGTTTCCCTAAGTTCTTGCTCAGCCTGTTTATCCTTTGTGTAGAG  150

seq1  AAAGGCCACTGATTTGTTTGAGTTAATTTTAAATCCAGCTACTCCCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCACTGATTTGTTTGAGTTAATTTTAAATCCAGCTACTCCCTTCA  200

seq1  AGTTGTTTATCAGGTTTAGAAGTAATAAAAAAAAAATACAAAGAACGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTTATCAGGTTTAGAAGTAATAAAAAAAAAATACAAAGAACGTAT  250

seq1  GAATGAATTTTCATGTATGTGTTTTTACTCCAAAGAAAGAAAAGGTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATTTTCATGTATGTGTTTTTACTCCAAAGAAAGAAAAGGTAAAT  300

seq1  AAAGAGATTAAAATATTTGAAAAAGAATCCTACATATTTTGAGAATGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATTAAAATATTTGAAAAAGAATCCTACATATTTTGAGAATGTTT  350

seq1  CTACATTAAATATAAATATCTGAAAAATAGTAATAAATCAAGTGTAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTAAATATAAATATCTGAAAAATAGTAATAAATCAAGTGTAAAAT  400

seq1  AACATGTGAAATAACAAATGCAGATTATTTACATTAAAGTAGTGAGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTGAAATAACAAATGCAGATTATTTACATTAAAGTAGTGAGACAT  450

seq1  GCTAGGAACAATTAAAGATAAGCTCATTCTACAAGTTACCTTTCAAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGAACAATTAAAGATAAGCTCATTCTACAAGTTACCTTTCAAAACC  500

seq1  TGTTATAATTTCTAGATTATAGTTTTCAAATATCATATCTGTATTATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAATTTCTAGATTATAGTTTTCAAATATCATATCTGTATTATTTC  550

seq1  AAGGGAGTGAATTATAGAGCATAAAGAAAAAAAATATATATATGTTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGTGAATTATAGAGCATAAAGAAAAAAAATATATATATGTTACAG  600

seq1  TTATTCTTAGGTCTATGTCTGGATGCTTCTAGACTCCATATACTCTAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTAGGTCTATGTCTGGATGCTTCTAGACTCCATATACTCTAATC  650

seq1  TTCTAAGCTGACTGTTTCAAACTGGCTTCTCTCAGGTTCTGACTGAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGCTGACTGTTTCAAACTGGCTTCTCTCAGGTTCTGACTGAATTT  700

seq1  GTCTACTTGACCTCAAAATAATTCTTACAATCTGTTCTAACCTTCTGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTTGACCTCAAAATAATTCTTACAATCTGTTCTAACCTTCTGTTC  750

seq1  CATTCTCATTTTCTAGCTTGTTTTCAATTGACCTGTACCACCTGTCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCATTTTCTAGCTTGTTTTCAATTGACCTGTACCACCTGTCTCTG  800

seq1  TGAAACTGTCCCATTAAATCTCTCTTCCCCTCTCTCTCTCTCTCTCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGTCCCATTAAATCTCTCTTCCCCTCTCTCTCTCTCTCTCTCTC  850

seq1  TGCCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCCCTCTCACCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCCCTCTCACCCTC  900

seq1  TCTGCTGCTGCTGCTCTCAAGAA-TTTTCTCTCTTTCCTTTGTTTTTCTA  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTGCTGCTGCTGCTCTCAAGAATTTTTCTCTCTTTCCTTTGTTTTTCTA  950

seq1  TTAAGTAGCTTTTCCTTCCCAATAGTCTCAGATTGAAATAACCTTTCTCC  999
      ||||||||||||||| | || |||||||||||||||||| ||||||||||
seq2  TTAAGTAGCTTTTCCCTTCCCATAGTCTCAGATTGAAAT-ACCTTTCTCC  999

seq1  GACCTATACTGCCAACT--CTTTCTTTGACTAATCATTTTATCTGT-GCC  1046
      |||||||||||||||||   |||||||||||||||||||||||||| |||
seq2  GACCTATACTGCCAACTTCTTTTCTTTGACTAATCATTTTATCTGTGGCC  1049

seq1  T-CAGTTAG-ATATAACTTTCAAACATAGCTGTTTCT  1081
      | ||||||| ||||||| ||||| |||||||||||||
seq2  TCCAGTTAGAATATAACCTTCAACCATAGCTGTTTCT  1086


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