BAC Information

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BAC

Clone NameB6Ng01-342G18
Chromosome6 (Build37)6 (Build37)
Map Location 132,948,481 - 132,949,458132,631,035 - 132,632,153
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109
Downstream geneEG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342G18.bB6Ng01-342G18.g
ACCGA125512GA125513
length9871,100
definitionB6Ng01-342G18.b B6Ng01-342G18.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(132,948,481 - 132,949,458)(132,631,035 - 132,632,153)
sequence
gaattctactaagtttaagctaaaattgtgttagttattttggaaataga
ttctttgtccataacaagagaccacgttaataaatgatgctgttttaaat
ttaattctctttctgtatttgtattgtgcacatgagtgtatgtgtttgta
atgcatacatataggagcctttgaagttcaggagagttgctgaatcttaa
gaaaccagctttactgagggctgtgagacatagcctgagtactgagaact
gaaccgcaaggcaggtcctttgcaaaagcagtaagtactcatttctagct
ctgacttatgatacagaagatgtgttttcattttcctttacattttatta
gtaagaaatgatttttgtcattacagaatttcagatgctatgtactaatc
tgtcttttctgaagaataaatatattgtattttaaaatattacttgactt
ttctccttgattagcacactgcctatatttctttatctctcagggagagc
tacaaacaggtagtggcaaccattccaagagaaagaggtatgttgcagaa
agtaaagcgaaactgaagttccatatccttgatatgctgctttaagattt
tgtatttaagattttgtatctttactttggtctcacccttgctttcttcc
tgcttttctccactaagcctcaattgctctcttttagaaatgaacaggtc
tattgtgtaccattgtatgctgtcagtatgcaatttgctttttaatttta
taggaattaaaattaatatactacatctacttggagtctcagaaagtact
ttggggttttaacaacagttaaaacattaaatatgaaagggtgtaggggt
attggagtaaacacattttgtattctgatatggccataagcctataggtg
tcagagaaagtattatggtggttctgaatgagaagtgttctctacagtct
tagttattaccaattgaccaaggtccaaagccattct
gaattcttgtctctttgcccacatcagctgctccagcatacaaacaaacc
catcctcatttcctcccatgaaatcaaaagaaatagatgcccaggtgggt
acaaatgtaccagatcatgagaaaaagtctttgacagcacactgtctaca
aagggataagtcaagaccaccatcagaatgttgcttaccctatatttaat
aaagaagagtaaaaatgaaccttaatttttacagctttcttagaggcctt
agttttcagatgcttagaataagtgtccttttgcttcattctcctggtgt
ggctacatagaagaaaaacaaaattcagatacacaacaaaaggatgataa
aaatcatattaagaaagggatatgctaagaaaacatttagagattccata
aaataaaatgtcaagttttcatttttgacaattcttaaatatacttagta
gccaattttcccgtgaaaatcagaaacagtgtcaaacagattattgttat
tgagataataacaagaaatacccttttaattcattgtctattacacacac
acacacacacacacacacacacacacacacatgcgcacaaaggcgttcaa
tgagttgcttatattaaggcaatagaagacaccgaggaaagtggtgcaaa
ctgtgaaacaatatgtagattctggtgagaagattttaaattaagaacac
tattgggctgaaatatttttgcataacttgcatcaaaagagatgcacaca
attattgtacacagaaaactgattctagagatagcaaggcaggtggaaat
agagtcaactctggaactcttctgactcctgccccaggcaatgttgcatt
ttcataaaataatgaactttatgaagtttagaagaattaacgattttaca
gaattatttgatttatataatttcaggacattagagtacttgttagaaat
tttaaagagatggttaatttttgataaaattaagtatcaaagtaagttca
cgtaccccttcatcatagaataataagaaaacactgataggtattaagag
tcatgagattttgtaattcagtgcataatttacactagagataatagatt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132948481_132949458
seq2: B6Ng01-342G18.b_44_1024

seq1  GAATTCTACTAAGTTTAAGCTAAAATTGTGTTAGTTATTTTGGAAATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTAAGTTTAAGCTAAAATTGTGTTAGTTATTTTGGAAATAGA  50

seq1  TTCTTTGTCCATAACAAGAGACCACGTTAATAAATGATGCTGTTTTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTCCATAACAAGAGACCACGTTAATAAATGATGCTGTTTTAAAT  100

seq1  TTAATTCTCTTTCTGTATTTGTATTGTGCACATGAGTGTATGTGTTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTCTTTCTGTATTTGTATTGTGCACATGAGTGTATGTGTTTGTA  150

seq1  ATGCATACATATAGGAGCCTTTGAAGTTCAGGAGAGTTGCTGAATCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATACATATAGGAGCCTTTGAAGTTCAGGAGAGTTGCTGAATCTTAA  200

seq1  GAAACCAGCTTTACTGAGGGCTGTGAGACATAGCCTGAGTACTGAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAGCTTTACTGAGGGCTGTGAGACATAGCCTGAGTACTGAGAACT  250

seq1  GAACCGCAAGGCAGGTCCTTTGCAAAAGCAGTAAGTACTCATTTCTAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCGCAAGGCAGGTCCTTTGCAAAAGCAGTAAGTACTCATTTCTAGCT  300

seq1  CTGACTTATGATACAGAAGATGTGTTTTCATTTTCCTTTACATTTTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTATGATACAGAAGATGTGTTTTCATTTTCCTTTACATTTTATTA  350

seq1  GTAAGAAATGATTTTTGTCATTACAGAATTTCAGATGCTATGTACTAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAATGATTTTTGTCATTACAGAATTTCAGATGCTATGTACTAATC  400

seq1  TGTCTTTTCTGAAGAATAAATATATTGTATTTTAAAATATTACTTGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTCTGAAGAATAAATATATTGTATTTTAAAATATTACTTGACTT  450

seq1  TTCTCCTTGATTAGCACACTGCCTATATTTCTTTATCTCTCAGGGAGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTGATTAGCACACTGCCTATATTTCTTTATCTCTCAGGGAGAGC  500

seq1  TACAAACAGGTAGTGGCAACCATTCCAAGAGAAAGAGGTATGTTGCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACAGGTAGTGGCAACCATTCCAAGAGAAAGAGGTATGTTGCAGAA  550

seq1  AGTAAAGCGAAACTGAAGTTCCATATCCTTGATATGCTGCTTTAAGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCGAAACTGAAGTTCCATATCCTTGATATGCTGCTTTAAGATTT  600

seq1  TGTATTTAAGATTTTGTATCTTTACTTTGGTCTCACCCTTGCTTTCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAAGATTTTGTATCTTTACTTTGGTCTCACCCTTGCTTTCTTCC  650

seq1  TGCTTTTCTCCACTAAGCCTCAATTGCTCTCTTTTAGAAATGAACAGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTCCACTAAGCCTCAATTGCTCTCTTTTAGAAATGAACAGGTC  700

seq1  TATTGTGTACCATTGTATGCTGTCAGTATGCAATTTGCTTTTTAATTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTACCATTGTATGCTGTCAGTATGCAATTTGCTTTTTAATTTTA  750

seq1  TAGGAATTAAAATTAATATACTACATCTACTTGGAGTCTCAGAAAGTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTAAAATTAATATACTACATCTACTTGGAGTCTCAGAAAGTACT  800

seq1  TTGGGGTTTTAACAACAGTTAAAACATTAAATATGAAAGGGTGTAGGGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTTTAACAACAGTTAAAACATTAAATATGAAAGGGTGTAGGGGT  850

seq1  ATTGGAGTAAACACATTTTGTATTCTGATATGGCCATAAGCCTATAGGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGTAAACACATTTTGTATTCTGATATGGCCATAAGCCTATAGGTG  900

seq1  TCAGAGAAGGTAATATGGTGGTT-TGAATGAGAAGTGTTCTCTACAGTCT  949
      |||||||| ||| |||||||||| ||||||||||||||||||||||||||
seq2  TCAGAGAAAGTATTATGGTGGTTCTGAATGAGAAGTGTTCTCTACAGTCT  950

seq1  TAGTTATTA-CAATTG-CCAAGGTCCAAAGC  978
      ||||||||| |||||| ||||||||||||||
seq2  TAGTTATTACCAATTGACCAAGGTCCAAAGC  981

seq1: chr6_132631035_132632153
seq2: B6Ng01-342G18.g_67_1166

seq1  GAATTCTTGTCTCTTTGCCCACATCAGCTGCTCCAGCATACAAACAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCTCTTTGCCCACATCAGCTGCTCCAGCATACAAACAAACC  50

seq1  CATCCTCATTTCCTCCCATGAAATCAAAAGAAATAGATGCCCAGGTGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCATTTCCTCCCATGAAATCAAAAGAAATAGATGCCCAGGTGGGT  100

seq1  ACAAATGTACCAGATCATGAGAAAAAGTCTTTGACAGCACACTGTCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTACCAGATCATGAGAAAAAGTCTTTGACAGCACACTGTCTACA  150

seq1  AAGGGATAAGTCAAGACCACCATCAGAATGTTGCTTACCCTATATTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATAAGTCAAGACCACCATCAGAATGTTGCTTACCCTATATTTAAT  200

seq1  AAAGAAGAGTAAAAATGAACCTTAATTTTTACAGCTTTCTTAGAGGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAGTAAAAATGAACCTTAATTTTTACAGCTTTCTTAGAGGCCTT  250

seq1  AGTTTTCAGATGCTTAGAATAAGTGTCCTTTTGCTTCATTCTCCTGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCAGATGCTTAGAATAAGTGTCCTTTTGCTTCATTCTCCTGGTGT  300

seq1  GGCTACATAGAAGAAAAACAAAATTCAGATACACAACAAAAGGATGATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACATAGAAGAAAAACAAAATTCAGATACACAACAAAAGGATGATAA  350

seq1  AAATCATATTAAGAAAGGGATATGCTAAGAAAACATTTAGAGATTCCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATATTAAGAAAGGGATATGCTAAGAAAACATTTAGAGATTCCATA  400

seq1  AAATAAAATGTCAAGTTTTCATTTTTGACAATTCTTAAATATACTTAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATGTCAAGTTTTCATTTTTGACAATTCTTAAATATACTTAGTA  450

seq1  GCCAATTTTCCCGTGAAAATCAGAAACAGTGTCAAACAGATTATTGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTTTCCCGTGAAAATCAGAAACAGTGTCAAACAGATTATTGTTAT  500

seq1  TGAGATAATAACAAGAAATACCCTTTTAATTCATTGTCTATTACACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAATAACAAGAAATACCCTTTTAATTCATTGTCTATTACACACAC  550

seq1  ACACACACACACACACACACACACACACACATGCGCACAAAGGCGTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACATGCGCACAAAGGCGTTCAA  600

seq1  TGAGTTGCTTATATTAAGGCAATAGAAGACACCGAGGAAAGTGGTGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGCTTATATTAAGGCAATAGAAGACACCGAGGAAAGTGGTGCAAA  650

seq1  CTGTGAAACAATATGTAGATTCTGGTGAGAAGATTTTAAATTAAGAACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAACAATATGTAGATTCTGGTGAGAAGATTTTAAATTAAGAACAC  700

seq1  TATTGGGCTGAAATATTTTTGCATAACTTGCATCAAAAGAGATGCACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGCTGAAATATTTTTGCATAACTTGCATCAAAAGAGATGCACACA  750

seq1  ATTATTGTACACAGAAAACTGATTCTAGAGATAGCAAGGCAGGTGGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTACACAGAAAACTGATTCTAGAGATAGCAAGGCAGGTGGAAAT  800

seq1  AGAGTCAACTCTGGAACTCTTCTGACTCCTGCCCCAGGCAATGTTGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAACTCTGGAACTCTTCTGACTCCTGCCCCAGGCAATGTTGCATT  850

seq1  TTCATAAAATAATGAACTTTATGAAGTTTAGAAGAATTAACGATTTTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAATAATGAACTTTATGAAGTTTAGAAGAATTAACGATTTTACA  900

seq1  GAATTATTTGATTTATATAATTTCAGGACATTAGAGTACTTGTTAGAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTTGATTTATATAATTTCAGGACATTAGAGTACTTGTTAGAAAT  950

seq1  TTTAAGGAGATGGTTTAATTTTTTGATTAAAATTAAAGTAATCAAAAGTA  1000
      ||||| |||||||||  | ||||||| ||||||| |||| ||| ||||| 
seq2  TTTAAAGAGATGGTT--AATTTTTGA-TAAAATT-AAGT-ATC-AAAGT-  993

seq1  AAGTTCAACGTACCCCTTCATCATAGAATAAT-AGAAAACACTGGATAGG  1049
      |||||| ||||||||||||||||||||||||| |||||||||| ||||||
seq2  AAGTTC-ACGTACCCCTTCATCATAGAATAATAAGAAAACACT-GATAGG  1041

seq1  TTATTAAAGGAGTTCAATGAGATTTTGTAAATTTCAAGTGCATAAATTAC  1099
       ||||||  ||||   ||||||||||||||  ||| ||||||||| ||||
seq2  -TATTAA--GAGT--CATGAGATTTTGTAA--TTC-AGTGCATAATTTAC  1083

seq1  ACTAGGAAGATAAATAGATT  1119
      |||||  |||| ||||||||
seq2  ACTAG--AGAT-AATAGATT  1100