BAC Information

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BAC

Clone NameB6Ng01-344K22
Chromosome6 (Build37)
Map Location 24,631,668 - 24,632,708
singlet/doubletsinglet
Overlap genenone
Upstream geneCadps2, Tas2r118, LOC100041082, Slc13a1, LOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl
Downstream gene4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358, Gpr37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344K22.bB6Ng01-344K22.g
ACCGA127105GA127106
length1,037499
definitionB6Ng01-344K22.b B6Ng01-344K22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttagctgctgactgccaggatacctttcccctcagacctgtaa
cacttgtaattacaaattttttttgacagtataaacttaatatataaatt
gtactttaagcctgactctactgttgcaaggggtagtaaaaatgacagtt
tattaaatttaaatgccctccatttaattacttcagagcaggactgaatg
ggcattcagccactaagatttcctgaaactcttggtcaagtgtgtcaagt
ataagcagtgttgggtttcgtgcaggcctgtgccctagctgcaagagatc
ctgagatttaaatctcaacgttggggatctgcagttttctaagtcagaag
ttcccaagggaaaggaaggatattcaaaagggactcaacagctagttaat
ttaattacaaacagatggagcttcagatgctgactgcgttaggaagaggt
ctcttttgcagagaaagcagtaagaatagaaaagcaaacacaaataataa
ctggatttccagttgtgtggcaactccatgatgccatcttgcatttctcc
ttacatgttactactagtgactatgagctaattgcctgtggctagaattt
aacattattcatttttttgtggttgttttaatatataaatgtaggggcct
ggtctgaggctgaggtcctgttccccaattggttcttgatctgtcagtaa
caaagccatgggccaatactgggtagaaggaataggcaggacttctgggt
tcctgcaggaaaagcagacagatgcaggggaggagaggagagttccccat
catggtttggagagagaaccaaagcagccatgtgaggtcttgggaggaat
gtcaacacaggccctcctacaggcaggtagtcaaagcctctaaagtgtag
ggcaagaggatcagagataagaacattgttaaaggcacacttttccagca
gagatagtagtgcccagcgttgtgttcaaagcaagtgaaaagaacaactg
tgtgtttgtgtgtgccacatgcgtgtcttttatctgt
gaattcatgaaattcctagccaaatggatggacctggagggcatcatcct
gagtgaggtaacacattcacaaaggaactcacacaatatgtactcactga
taagtggatattagcccaaaacctaggatacccaagatataagatacaat
ttgctaaacacatgaaactcaagaagaatgaagactgaagtgtggacact
atgcccctccttagaattgggaacaaaacacccatggaaggagttacaga
gacaaagtttggagctgagacaaaaggatggatcagcttccaaacgcaga
cacaattgcatacactagcaagattttgttgaaaggacccagatgtagct
gtctcttgtgagactttgccgaggcctagcaaacacagaagtggatgctc
acagtcagctattggatggatcacagggctcccaatggaggagctagaga
aagtacccaaggagctaaagggatctgcaaccctataggtggaacaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_24631668_24632708
seq2: B6Ng01-344K22.b_46_1082

seq1  GAATTCCTTAGCTGCTGACTGCCAGGATACCTTTCCCCTCAGACCTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGCTGCTGACTGCCAGGATACCTTTCCCCTCAGACCTGTAA  50

seq1  CACTTGTAATTACAAATTTTTTTTGACAGTATAAACTTAATATATAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTAATTACAAATTTTTTTTGACAGTATAAACTTAATATATAAATT  100

seq1  GTACTTTAAGCCTGACTCTACTGTTGCAAGGGGTAGTAAAAATGACAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTAAGCCTGACTCTACTGTTGCAAGGGGTAGTAAAAATGACAGTT  150

seq1  TATTAAATTTAAATGCCCTCCATTTAATTACTTCAGAGCAGGACTGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATTTAAATGCCCTCCATTTAATTACTTCAGAGCAGGACTGAATG  200

seq1  GGCATTCAGCCACTAAGATTTCCTGAAACTCTTGGTCAAGTGTGTCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCAGCCACTAAGATTTCCTGAAACTCTTGGTCAAGTGTGTCAAGT  250

seq1  ATAAGCAGTGTTGGGTTTCGTGCAGGCCTGTGCCCTAGCTGCAAGAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAGTGTTGGGTTTCGTGCAGGCCTGTGCCCTAGCTGCAAGAGATC  300

seq1  CTGAGATTTAAATCTCAACGTTGGGGATCTGCAGTTTTCTAAGTCAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTTAAATCTCAACGTTGGGGATCTGCAGTTTTCTAAGTCAGAAG  350

seq1  TTCCCAAGGGAAAGGAAGGATATTCAAAAGGGACTCAACAGCTAGTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAGGGAAAGGAAGGATATTCAAAAGGGACTCAACAGCTAGTTAAT  400

seq1  TTAATTACAAACAGATGGAGCTTCAGATGCTGACTGCGTTAGGAAGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTACAAACAGATGGAGCTTCAGATGCTGACTGCGTTAGGAAGAGGT  450

seq1  CTCTTTTGCAGAGAAAGCAGTAAGAATAGAAAAGCAAACACAAATAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTGCAGAGAAAGCAGTAAGAATAGAAAAGCAAACACAAATAATAA  500

seq1  CTGGATTTCCAGTTGTGTGGCAACTCCATGATGCCATCTTGCATTTCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTTCCAGTTGTGTGGCAACTCCATGATGCCATCTTGCATTTCTCC  550

seq1  TTACATGTTACTACTAGTGACTATGAGCTAATTGCCTGTGGCTAGAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTTACTACTAGTGACTATGAGCTAATTGCCTGTGGCTAGAATTT  600

seq1  AACATTATTCATTTTTTTGTGGTTGTTTTAATATATAAATGTAGGGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTATTCATTTTTTTGTGGTTGTTTTAATATATAAATGTAGGGGCCT  650

seq1  GGTCTGAGGCTGAGGTCCTGTTCCCCAATTGGTTCTTGATCTGTCAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGAGGCTGAGGTCCTGTTCCCCAATTGGTTCTTGATCTGTCAGTAA  700

seq1  CAAAGCCATGGGCCAATACTGGGTAGAAGGAATAGGCAGGACTTCTGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCATGGGCCAATACTGGGTAGAAGGAATAGGCAGGACTTCTGGGT  750

seq1  TCCTGCAGGAAAAGCAGACAGATGCAGGGGAGGAGAGGAGAGTTCCCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCAGGAAAAGCAGACAGATGCAGGGGAGGAGAGGAGAGTTCCCCAT  800

seq1  CATGGTTTGGAGAGAGAACC-AAGCAGCCATGTGAGGTCTTGGGAGGAAT  849
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATGGTTTGGAGAGAGAACCAAAGCAGCCATGTGAGGTCTTGGGAGGAAT  850

seq1  GTCAACACAGGCCCTCCTACAGGCAGGTAGTCAAAGCCTCTAAAGTGTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACACAGGCCCTCCTACAGGCAGGTAGTCAAAGCCTCTAAAGTGTAG  900

seq1  GGCAAGAGGATCAGAGATAAGAACATTGTTAAGGGCACACTTTTCCAGGC  949
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  GGCAAGAGGATCAGAGATAAGAACATTGTTAAAGGCACACTTTTCCA-GC  949

seq1  AGGAGATAGTAGTGCCCAGCGGTTGTGTCCAAAGGCAAGTTGAAAAGGAA  999
      | |||||||||||||||||| ||||||| |||| ||||| |||||| |||
seq2  A-GAGATAGTAGTGCCCAGC-GTTGTGTTCAAA-GCAAG-TGAAAA-GAA  994

seq1  CAACTGTGTGTTTGTGTGTG-CACATGCGTGTCTTTTATCTGT  1041
      |||||||||||||||||||| ||||||||||||||||||||||
seq2  CAACTGTGTGTTTGTGTGTGCCACATGCGTGTCTTTTATCTGT  1037