BAC Information

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BAC

Clone NameB6Ng01-345D23
Chromosome6 (Build37)
Map Location 142,958,264 - 142,959,369
singlet/doubletsinglet
Overlap genenone
Upstream geneSlco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2, Ldhb, Kcnj8, Abcc9, 5330439B14Rik, Cmas, Gm766, EG665037, St8sia1, LOC665056
Downstream gene5730419I09Rik, Etnk1, D6Ertd474e, Sox5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345D23.bB6Ng01-345D23.g
ACCGA127505GA127506
length1,0971,163
definitionB6Ng01-345D23.b B6Ng01-345D23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaccccccaccaccccaccctgccaacacacacacacacacac
acactcacctagtggctcctggtttcagcttatcagactatgacttcatc
cacagcatctctggagacagctcttatatggctcctacccaggtttctta
gcaaccttttgagctatcttaggagtctccaaaaggctatatacggtata
aagactacagcttaccttcagagaagccatccagtgagaccctctgacat
ttccctatgttcttgggagcatgcccctcctacttgggtgtgcctttctt
ctgaacaaatgcttttcttaaccctatttaaaatgtctttaatgaaatca
ctaaccctgttgactaaactggctaatactctttttagggtcaaagctct
gagctcctattggtccgagtcaaagtctattaagtcttcaggccagaggg
tgggagcatggaactgtctcatccactggccactgagaagcctaggacct
tagagggctgttccaacagtgtccagtgtctgacagacagaaggaccaca
cactggaagacacagacctagtcagtaaggacatccaagtgaataagaag
ggtctcacctgcagagaggttcctccaaggttcttctttacctatgttcc
ccagctctttcttctcccaggacccagctgtgcctgcagagaagttttgc
tcaaatgagagaacttcacttcactatctgcaccacaaatattagtttcc
tcccagaaaagaggcagagttgttccctcacctacaaataaaaggcaatt
ttctctgcgagggaaaacaaaacaaaaacaaaacaaacaaaacaccggga
aaacaaggcaaggcaaaggtgtctggcttgttcagctgctgtaaggtaaa
caacagcattcaatagcagtgttgaatacctaatagcccaaggacggcaa
gagtgccataagcacgcagaatacacacacgcacacacactcacacacat
gcacacacagcacactacgaccagactacacgcagtagtactcagcagag
ctactgacttcagaggtggagtgctggaaaagactgtatgttctcag
gaattcttacctgagaaatactgaatggctgagaagcacctgaaaaagat
gttcagcatccttaatcatcagggaaatacaaatcaaagcaaccctgaga
ttctccacctcacaccagtcagaatggctaagatcaaaaattcagttgac
agcagatgctggcgaggatgtggagaaaaaggaacactcctccgttattg
gtgggattgcaagcttgtacaaccactctagaaatcagtctggcagttcc
tcagaaaattgaacatagtactacaggaggatcccgcaatacctctcttg
ggcatatatccagaagatgttccaactggaaagaaggacacatgctctac
tatgttcatagcagtcttatttataatagccagaagctggaaagaaccca
gatgtccctcaacagaggaatggatacagaaaatgtggtacatttacaca
atggagtactactcagctattaaaaagaatgaatttatgaaattcctagg
caaatggatggaactagagggcatcatcctgagtgaggtaacccaatcac
aaaagaactcacatgatttgtactcactgataagtggatattagcccaga
aacttagaatacccaagatacaagatacaatttgcaaaacacatgaaact
caaaaagaacgaagaccaaagtatggacactttgcccattcttagaattg
ggaacaaaacacccatggaaggagttacagagacaaagtttggagctgag
acgaaaggatggaccatctagagactgccgtacccggggatccatcccat
aatcagcctccaaacgctgacaccgttgcatatgccagcaagattttgct
gaaaggaccctgatatagctgtctcttgtgaggctctgccgggtacctgg
caaatacagaagtggatgctcacagtcagctattggatggaacacagggc
acccaatggaggagctagagaaagtacccaaggagctaaggggtctgcac
cctataggtggaacacatatgaactatagtacccctggagctcatgtctc
taggtgcatatgtatcagagaatagcttaggtgtcattcatggaaagaga
aggtcaattgtcctcgcaaccttatatgcctccattagagtacgggggaa
agagtcgcctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_142958264_142959369
seq2: B6Ng01-345D23.b_49_1145

seq1  GAATTCTAACCCCCCACCACCCCACCCTGCCAACACACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACCCCCCACCACCCCACCCTGCCAACACACACACACACACAC  50

seq1  ACACTCACCTAGTGGCTCCTGGTTTCAGCTTATCAGACTATGACTTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCACCTAGTGGCTCCTGGTTTCAGCTTATCAGACTATGACTTCATC  100

seq1  CACAGCATCTCTGGAGACAGCTCTTATATGGCTCCTACCCAGGTTTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATCTCTGGAGACAGCTCTTATATGGCTCCTACCCAGGTTTCTTA  150

seq1  GCAACCTTTTGAGCTATCTTAGGAGTCTCCAAAAGGCTATATACGGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTTTTGAGCTATCTTAGGAGTCTCCAAAAGGCTATATACGGTATA  200

seq1  AAGACTACAGCTTACCTTCAGAGAAGCCATCCAGTGAGACCCTCTGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTACAGCTTACCTTCAGAGAAGCCATCCAGTGAGACCCTCTGACAT  250

seq1  TTCCCTATGTTCTTGGGAGCATGCCCCTCCTACTTGGGTGTGCCTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTATGTTCTTGGGAGCATGCCCCTCCTACTTGGGTGTGCCTTTCTT  300

seq1  CTGAACAAATGCTTTTCTTAACCCTATTTAAAATGTCTTTAATGAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAAATGCTTTTCTTAACCCTATTTAAAATGTCTTTAATGAAATCA  350

seq1  CTAACCCTGTTGACTAAACTGGCTAATACTCTTTTTAGGGTCAAAGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCTGTTGACTAAACTGGCTAATACTCTTTTTAGGGTCAAAGCTCT  400

seq1  GAGCTCCTATTGGTCCGAGTCAAAGTCTATTAAGTCTTCAGGCCAGAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTATTGGTCCGAGTCAAAGTCTATTAAGTCTTCAGGCCAGAGGG  450

seq1  TGGGAGCATGGAACTGTCTCATCCACTGGCCACTGAGAAGCCTAGGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCATGGAACTGTCTCATCCACTGGCCACTGAGAAGCCTAGGACCT  500

seq1  TAGAGGGCTGTTCCAACAGTGTCCAGTGTCTGACAGACAGAAGGACCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGCTGTTCCAACAGTGTCCAGTGTCTGACAGACAGAAGGACCACA  550

seq1  CACTGGAAGACACAGACCTAGTCAGTAAGGACATCCAAGTGAATAAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAGACACAGACCTAGTCAGTAAGGACATCCAAGTGAATAAGAAG  600

seq1  GGTCTCACCTGCAGAGAGGTTCCTCCAAGGTTCTTCTTTACCTATGTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCACCTGCAGAGAGGTTCCTCCAAGGTTCTTCTTTACCTATGTTCC  650

seq1  CCAGCTCTTTCTTCTCCCAGGACCCAGCTGTGCCTGCAGAGAAGTTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCTTTCTTCTCCCAGGACCCAGCTGTGCCTGCAGAGAAGTTTTGC  700

seq1  TCAAATGAGAGAACTTCACTTCACTATCTGCACCACAAATATTAGTTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGAGAGAACTTCACTTCACTATCTGCACCACAAATATTAGTTTCC  750

seq1  TCCCAGAAAAGAGGCAGAGTTGTTCCCTCACCTACAAATAAAAGGCAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAAAAGAGGCAGAGTTGTTCCCTCACCTACAAATAAAAGGCAATT  800

seq1  TTCTCTGCGAGGGAAAACAAAACAAAAACAAAACAAACAAAACACCGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCGAGGGAAAACAAAACAAAAACAAAACAAACAAAACACCGGGA  850

seq1  AAACAAGGCAAGGCAAAGGTGTCTGGCTTGTTCAGCTGCTGTAAGGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGCAAGGCAAAGGTGTCTGGCTTGTTCAGCTGCTGTAAGGTAAA  900

seq1  CAACAGCATTCAATAGCAGGTGTTGAATACCTAATAGCCCAAGGACGGCA  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAACAGCATTCAATAGCA-GTGTTGAATACCTAATAGCCCAAGGACGGCA  949

seq1  AGAGTGCCATAAGCACGCAGAATACACACACGCACACACACTCACACACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCCATAAGCACGCAGAATACACACACGCACACACACTCACACACA  999

seq1  TGCACACACAAGCACACTAAGGACCAGGACCACCACGCAGTAGGTACTCA  1050
      ||||||||| |||||||| | ||||| ||| | ||||||||| |||||||
seq2  TGCACACAC-AGCACACT-ACGACCA-GACTA-CACGCAGTA-GTACTCA  1044

seq1  GCAGAGGCTTACTGACTTCAGGAAGGGTGAGTGCT-GAAAAGACTGTAAT  1099
      ||||||   ||||||||||||  |||  ||||||| ||||||||||||  
seq2  GCAGAG--CTACTGACTTCAG--AGGTGGAGTGCTGGAAAAGACTGTATG  1090

seq1  GTCTCAG  1106
       ||||||
seq2  TTCTCAG  1097