BAC Information

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BAC

Clone NameB6Ng01-346N16
Chromosome6 (Build37)2 (Build37)
Map Location 35,255,382 - 35,255,91370,996,457 - 70,996,933
singlet/doubletsingletsinglet
Overlap geneSlc13a4
Upstream geneAkr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4, Nup205, 1810058I24Rik
Downstream geneBC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327, 9330158H04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346N16.bB6Ng01-346N16.g
ACCGA128636GA128637
length526930
definitionB6Ng01-346N16.b B6Ng01-346N16.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(35,255,382 - 35,255,913)(70,996,457 - 70,996,933)
sequence
taaggagtttagtatcaggatctccaagttgggtgcaaggggtggaagat
aggcaagagataaaagcagggttatgtacctactttgtgcttcctgtggg
cactagttaaggtcctcaaagatgaaggctattggtagggtatgaggaag
cagggcttcctaacactgcttcagaaaagagggtaatgtgtctctcatgg
gaattctcttaaactaagctggcatgaaaaaaagatgtcactggactgtg
cacaaggtccccagtggaggagctagagaaaggaccaagggagctgaagg
ggtttgcagtcccataggagggacaacaatatgaactaaccagtaccccc
agagctcccagggactaaaccaccaaccaaagagtacacatggagggacc
catggctccagctgcatatgtagcagaggatggctttgttggacatcaat
gggaggagaggcccttggttgagaaggctcggtgccccagagtagaggaa
tgccagggcagggaattgggagtggg
gaattccataatgttttcatgtcattcaagttgttatgttagactcaact
atggtttactccagggtggggagtaaacccctttccttttattaatgatg
aaaatgaaaaaaggcaaagaaaggaggaagtaataggaattctgttggtt
tgctttgtgggaaagaccctcagctgatgaggaaagaaagcatggagaat
gaactactgctgatggaatccacgatcaagagtccagcaagtgtggtccc
aggtcagcacaaatggcatcctcccatgacagatgctgtctcccttctca
gactaaacttgggtctcataactccttcccagacctgtgccagtgccatg
ctgactacaggggatgctctgtcaccagaatattgcctccccagtgaagg
tagaacaccaacttgccatccagacatggggtctgtgttcagtgctgtgg
gaagccgttgcagagtggcagttgcagagtggcagttacagagtggcagt
tacagagtggcagttacagagtggcagttgcagagtggcagttacagagt
ggcagttgcagagtggcagttggctacagctggccaccacacatacatag
ccagtaaaggttcttttgccaaggtgaggttttgagaattgacaaaagtt
aaccaatcagatgagagacaagttaaccaatcagatgagagacaagttaa
ccaatcagatgagagacaagttaaccaatcagatgagagagaacgcctgt
cctaggcctataaaagcagcaccagttctgggctcgaggtcttttcgcct
ctacaatcaagctctcccaataaacgtgtgcagaaaggatcctgttgcct
cgtcgttcttcctggccagtcgagcgcgcgcaagacagtgctttttcttt
ttttctgctgtgtccaaatccctgattaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35255382_35255913
seq2: B6Ng01-346N16.b_49_580

seq1  GAATTCTAAGGAGTTTAGTATCAGGATCTCCAAGTTGGGTGCAAGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGGAGTTTAGTATCAGGATCTCCAAGTTGGGTGCAAGGGGTG  50

seq1  GAAGATAGGCAAGAGATAAAAGCAGGGTTATGTACCTACTTTGTGCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAGGCAAGAGATAAAAGCAGGGTTATGTACCTACTTTGTGCTTCC  100

seq1  TGTGGGCACTAGTTAAGGTCCTCAAAGATGAAGGCTATTGGTAGGGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCACTAGTTAAGGTCCTCAAAGATGAAGGCTATTGGTAGGGTATG  150

seq1  AGGAAGCAGGGCTTCCTAACACTGCTTCAGAAAAGAGGGTAATGTGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGGGCTTCCTAACACTGCTTCAGAAAAGAGGGTAATGTGTCTC  200

seq1  TCATGGGAATTCTCTTAAACTAAGCTGGCATGAAAAAAAGATGTCACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGAATTCTCTTAAACTAAGCTGGCATGAAAAAAAGATGTCACTGG  250

seq1  ACTGTGCACAAGGTCCCCAGTGGAGGAGCTAGAGAAAGGACCAAGGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCACAAGGTCCCCAGTGGAGGAGCTAGAGAAAGGACCAAGGGAGC  300

seq1  TGAAGGGGTTTGCAGTCCCATAGGAGGGACAACAATATGAACTAACCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGGTTTGCAGTCCCATAGGAGGGACAACAATATGAACTAACCAGT  350

seq1  ACCCCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTACACATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTACACATGGA  400

seq1  GGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCTTTGTTGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCTTTGTTGGAC  450

seq1  ATCAATGGGAGGAGAGGCCCTTGGTTGAGAAGGCTCGGTGCCCCAGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGGGAGGAGAGGCCCTTGGTTGAGAAGGCTCGGTGCCCCAGAGTA  500

seq1  GAGGAATGCCAGGGCAGGGAAGTGGGAGTGGG  532
      ||||||||||||||||||||| ||||||||||
seq2  GAGGAATGCCAGGGCAGGGAATTGGGAGTGGG  532

seq1: chr2_70996457_70996933
seq2: B6Ng01-346N16.g_515_956

seq1  CTGTGGGAAGCCGTTACAGAGTGGCAGTTACAGAGTGGCAGTTACAGAGT  50
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  CTGTGGGAAGCCGTTGCAGAGTGGCAGTTGCAGAGTGGCAGTTACAGAGT  50

seq1  GGCAGTTACAGAGTGGCAGTTAGAGTGGCAGTTAGAGTGGCAGTTAGAGT  100
      |||||||||                                    |||||
seq2  GGCAGTTAC------------------------------------AGAGT  64

seq1  GGCAGTTACAGAATGGCAGTTACAGAGTGGCAGTTACAGAGTGGCAGTTG  150
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  GGCAGTTACAGAGTGGCAGTTGCAGAGTGGCAGTTACAGAGTGGCAGTTG  114

seq1  CAGAGTGGCAGTTGGCTACAGCTGGCCACCACACATACATAGCCAGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGGCAGTTGGCTACAGCTGGCCACCACACATACATAGCCAGTAAA  164

seq1  GGTTCTTTTGCCAAGGTGAGGTTTTGAGAATTGACAAAAGTTAACCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTTGCCAAGGTGAGGTTTTGAGAATTGACAAAAGTTAACCAATC  214

seq1  AGATGAGAGACAAGTTAACCAATCAGATGAGAGACAAGTTAACCAATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGAGACAAGTTAACCAATCAGATGAGAGACAAGTTAACCAATCAG  264

seq1  ATGAGAGACAAGTTAACCAATCAGATGAGAGAGAACGCCTGTCCTAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGACAAGTTAACCAATCAGATGAGAGAGAACGCCTGTCCTAGGCC  314

seq1  TATAAAAGCAGCACCAGTTCTGGGCTCGAGGTCTTTTCGCCTCTACAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGCAGCACCAGTTCTGGGCTCGAGGTCTTTTCGCCTCTACAATC  364

seq1  AAGCTCTCCCAGTAAACGTGTGCAG-AAGGATCCTGTTGCAGCGTCGTTC  449
      ||||||||||| ||||||||||||| ||||||||||||||  ||||||||
seq2  AAGCTCTCCCAATAAACGTGTGCAGAAAGGATCCTGTTGCCTCGTCGTTC  414

seq1  TTCCTGGCCAGTCGAGCGCGCGCAAGAC  477
      ||||||||||||||||||||||||||||
seq2  TTCCTGGCCAGTCGAGCGCGCGCAAGAC  442