MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-348B20
Chromosome	6 (Build37)
Map Location	64,556,388 - 64,556,518
singlet/doublet	singlet
Overlap gene	Grid2
Upstream gene	none
Downstream gene	Atoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik, 9030611K07Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Grid2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14804 MGI:95813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atoh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11921 MGI:104654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041833 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC667115 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Smarcad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13990 MGI:95453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptgds2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54486 MGI:1859384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042741 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 176 ESTs, 4 Proteins pseudo : _no_value

name	LOC100041858 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC634745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:634745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	EG667141 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667141 MGI:3647865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein pseudo : _no_value

name	C130060K24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243407 MGI:2441881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9030611K07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414084 MGI:3041165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grid2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130886 GeneID:14804 MGI:95813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, delta 2 transcript_id : NM_008167.2

name	Atoh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349947 GeneID:11921 MGI:104654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : atonal homolog 1 (Drosophila) transcript_id : NM_007500.3

name	Smarcad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62543564 GeneID:13990 MGI:95453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` transcript_id : NM_007958.1

name	Ptgds2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382100 GeneID:54486 MGI:1859384
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin D2 synthase 2, hematopoietic transcript_id : NM_019455.3

name	LOC634745 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255170 GeneID:634745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to zinc finger protein 533 transcript_id : XM_001477139.1

name	C130060K24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380917 GeneID:243407 MGI:2441881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C130060K24 gene transcript_id : NM_175524.3

name	9030611K07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665743 GeneID:414084 MGI:3041165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030611K07 gene transcript_id : NM_001001495.2

name	Grid2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680091 CCDS:CCDS20202.1 GeneID:14804 MGI:95813
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : creeper; hotfoot; lurcher; minisatellite 10ac detected by probe MMS10 product : glutamate receptor, ionotropic, delta 2 protein_id : NP_032193.1

name	Atoh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680742 CCDS:CCDS20203.1 GeneID:11921 MGI:104654
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0031490 - chromatin DNA binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IMP]; GO:0042491 - auditory receptor cell differentiation [Evidence IDA] [Evidence IMP]; GO:0042668 - auditory receptor cell fate determination [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045609 - positive regulation of auditory receptor cell differentiation [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IMP]; GO:0045664 - regulation of neuron differentiation [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : atonal homolog 1 protein_id : NP_031526.1

name	Smarcad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62543565 CCDS:CCDS20204.1 GeneID:13990 MGI:95453
definition	GO_component : GO:0016363 - nuclear matrix [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0016568 - chromatin modification [Evidence ISS]; GO:0009117 - nucleotide metabolism [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0051260 - protein homooligomerization [Evidence ISS]; GO:0000018 - regulation of DNA recombination [Evidence ISS] codon_start : 1 note : enhancer trap locus 1 product : SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` protein_id : NP_031984.1

name	Ptgds2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980908 CCDS:CCDS20205.1 GeneID:54486 MGI:1859384
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004364 - glutathione transferase activity [Evidence ISS]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0004667 - prostaglandin-D synthase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0001516 - prostaglandin biosynthesis [Evidence IEA]; GO:0006693 - prostaglandin metabolism [Evidence IDA] codon_start : 1 exception : mismatches in translation product : prostaglandin D2 synthase 2, hematopoietic protein_id : NP_062328.2

name	LOC634745 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255171 GeneID:634745
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477189.1

name	C130060K24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425292 CCDS:CCDS20206.1 GeneID:243407 MGI:2441881
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC243407 protein_id : NP_780733.1

name	9030611K07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665744 GeneID:414084 MGI:3041165
definition	codon_start : 1 note : TNFAIP3 interacting protein 3; TNFAIP3-interacting protein 3 product : RIKEN cDNA 9030611K07 protein_id : NP_001001495.2

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 1 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 2 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 3 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 4 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 5 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 6 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 7 pseudo : _no_value

name	LOC100041833 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041833
definition	number : 8 pseudo : _no_value

name	LOC667115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667115
definition	number : 1 pseudo : _no_value

name	LOC667115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667115
definition	number : 2 pseudo : _no_value

name	LOC100041858 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041858
definition	number : 1 pseudo : _no_value

name	LOC100041858 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041858
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:123662
definition	standard_name : 24.MMHAP88FLH3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:142606
definition	standard_name : D6Rck314

name	(CDS detail)
type	STS
link
xref	UniSTS:124375
definition	standard_name : 40.MMHAP64FRF10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:142608
definition	standard_name : D6Rck317

name	(CDS detail)
type	STS
link
xref	UniSTS:142610
definition	standard_name : D6Rck325

name	(CDS detail)
type	STS
link
xref	UniSTS:142609
definition	standard_name : D6Rck324

name	(CDS detail)
type	STS
link
xref	UniSTS:123846
definition	standard_name : 29.MHAa92c5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:142616
definition	standard_name : D6Rck344

name	(CDS detail)
type	STS
link
xref	UniSTS:124006
definition	standard_name : 32.MMHAP88FLC5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:142617
definition	standard_name : D6Rck345

name	(CDS detail)
type	STS
link
xref	UniSTS:142618
definition	standard_name : D6Rck346

name	(CDS detail)
type	STS
link
xref	UniSTS:142619
definition	standard_name : D6Rck347

name	(CDS detail)
type	STS
link
xref	UniSTS:123488
definition	standard_name : RH118302

name	(CDS detail)
type	STS
link
xref	UniSTS:142621
definition	standard_name : D6Rck354

name	(CDS detail)
type	STS
link
xref	UniSTS:142623
definition	standard_name : D6Rck357

name	(CDS detail)
type	STS
link
xref	UniSTS:142624
definition	standard_name : D6Rck358

name	(CDS detail)
type	STS
link
xref	UniSTS:142625
definition	standard_name : D6Rck359

name	(CDS detail)
type	STS
link
xref	UniSTS:142626
definition	standard_name : D6Rck360

name	(CDS detail)
type	STS
link
xref	UniSTS:142628
definition	standard_name : D6Rck362

name	(CDS detail)
type	STS
link
xref	UniSTS:249581
definition	standard_name : BF390815

name	(CDS detail)
type	STS
link
xref	UniSTS:142630
definition	standard_name : D6Rck365

name	(CDS detail)
type	STS
link
xref	UniSTS:143255
definition	standard_name : Grid2

name	(CDS detail)
type	STS
link
xref	UniSTS:143256
definition	standard_name : Grid2

name	(CDS detail)
type	STS
link
xref	UniSTS:207969
definition	standard_name : AI450142

name	(CDS detail)
type	STS
link
xref	UniSTS:124832
definition	standard_name : D43694

name	(CDS detail)
type	STS
link
xref	UniSTS:207968
definition	standard_name : BB385668

name	(CDS detail)
type	STS
link
xref	UniSTS:130849
definition	standard_name : D6Mit299

name	(CDS detail)
type	STS
link
xref	UniSTS:179384
definition	standard_name : AU016938

name	(CDS detail)
type	STS
link
xref	UniSTS:142612
definition	standard_name : D6Rck330

name	(CDS detail)
type	STS
link
xref	UniSTS:36573
definition	standard_name : A003A21

name	(CDS detail)
type	STS
link
xref	UniSTS:498357
definition	standard_name : Snx10

name	(CDS detail)
type	STS
link
xref	UniSTS:130719
definition	standard_name : D6Mit175

name	(CDS detail)
type	STS
link
xref	UniSTS:145243
definition	standard_name : AU048793

name	(CDS detail)
type	STS
link
xref	UniSTS:124470
definition	standard_name : 42.MMHAP62FLF6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:235460
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179383
definition	standard_name : AW226546

name	(CDS detail)
type	STS
link
xref	UniSTS:142613
definition	standard_name : D6Rck333

name	(CDS detail)
type	STS
link
xref	UniSTS:130718
definition	standard_name : D6Mit174

name	(CDS detail)
type	STS
link
xref	UniSTS:674
definition	standard_name : SHGC-76423

name	(CDS detail)
type	STS
link
xref	UniSTS:130871
definition	standard_name : D6Mit318

name	(CDS detail)
type	STS
link
xref	UniSTS:124439
definition	standard_name : 41.MMHAP87FRF11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130666
definition	standard_name : D6Mit125

name	(CDS detail)
type	STS
link
xref	UniSTS:210373
definition	standard_name : RH136383

name	(CDS detail)
type	STS
link
xref	UniSTS:231622
definition	standard_name : RH142375

name	(CDS detail)
type	STS
link
xref	UniSTS:144847
definition	standard_name : Dnajc2

name	(CDS detail)
type	STS
link
xref	UniSTS:116609
definition	standard_name : D6Mit162

name	(CDS detail)
type	STS
link
xref	UniSTS:130707
definition	standard_name : D6Mit162.1

name	LOC100042741 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255206 GeneID:100042741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 176 ESTs, 4 Proteins product : similar to zinc finger protein 706 pseudo : _no_value transcript_id : XR_033904.1

name	EG667141 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94377403 GeneID:667141 MGI:3647865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : predicted gene, EG667141 pseudo : _no_value transcript_id : XR_001981.1

clone name	MSMg01-315K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089L09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-140A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-522L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070M01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-304G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535I19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-515F19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-448B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206A22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-348B20.b	B6Ng01-348B20.g
ACC	GA129506	GA129507
length	131	1,154
definition	B6Ng01-348B20.b	B6Ng01-348B20.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	tccaaagcctcatcatttcattaggtaaaataaatattttttcccaatat cacaggggtttgttgttattttggatttctcctcctcctcctcctcctcc tcctcctcctcttcctcctcctcctcctcct	gaattcctgatcttcccaagacttttatcatgaatgggtgttggatcttg tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt gagtttgtttatataatggattacattgatggattttcgtatattaaacc atccctgcatccctggaataaaacctacttggtcaggatggatgattgct ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc atcgatattcataagggaaattgctctgaagttttctatctttgttggat ctttctgtggtttacgtatcagagtatttgtggcttcatagaatgagttg ggtagagttccctctacttctattttgtggaatagtttgtgaagaactgg aattagatcttctttgaaggtctggtagaactctgcactaaacccatctg gtcctgggctatttttggctgggagactattaataactgcttctatttct ttaggggatataggactgtttagatcattaacttgatcctgattcaactt tggtacctggtatctgtctagaaatttgtccattttgtccaggttttcca gttttgttgagtatagccttttttagaaggatctgatggtgttttggatt tcttcaggatctgttgttatgtctcccccttcatttctgatattgttaat taggatgttgtccctgtgccctctagtgagtctagctaagggtttatcta tcttgttgattttctcaaagaaccaactcctcctttggttaattctttga atagttcttgtttccacttggttgatttcacccctgagtttgattatttc ctgccgtctactcctcttgggtgaattgcttccttttttttctagagctt tagatgtgttgtcaagctgctagtgtgtgctctctccagtttcttctgga ggcactcagagctatgagtttctctctagaaatgctttcatgtgtctcat aggtttgggtatgtgtggccttcattcagtaactctaaaagtctttaatt cttcttatctttcctcgaccaaggtatcatgagaaggagtttgttcaagt tccacggaagttgcttccataccttagttgtaatggagagatccaccccc ttag
quality values	Open. Hide. 62 62 36 36 62 62 62 62 62 62 59 46 62 49 59 62 62 62 49 49 62 59 17 12 16 11 13 13 27 30 23 48 32 62 62 62 59 62 62 54 62 62 54 62 59 59 62 62 62 62 59 59 62 59 62 59 54 59 62 62 62 62 62 62 62 18 13 19 19 23 23 23 43 35 62 54 49 54 62 62 62 62 62 62 62 62 62 62 49 49 49 18 23 18 18 19 18 13 13 13 9 13 13 10 11 13 36 49 46 10 10 10 10 10 10 8 10 12 30 23 38 21 17 31 24 12 18 23 10 16 10	Open. Hide. 62 47 33 39 62 62 62 62 62 44 47 56 41 38 34 34 29 43 59 62 44 59 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 49 54 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 42 49 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 56 56 56 49 49 56 56 56 56 43 56 56 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 50 62 56 56 62 56 62 62 56 56 56 47 56 56 56 62 46 62 56 62 62 62 62 62 56 52 52 52 62 52 52 52 48 52 47 62 62 62 52 52 43 40 54 62 62 62 54 42 47 43 62 62 62 62 62 62 62 62 54 54 54 58 54 54 54 52 58 58 58 58 58 52 58 58 54 52 45 58 58 58 45 36 54 54 58 54 58 58 52 58 58 58 58 58 58 52 58 54 54 52 58 54 58 58 58 58 58 58 38 47 52 52 52 52 58 40 58 52 52 52 54 58 54 52 49 31 49 48 41 47 51 54 58 51 49 58 52 58 58 58 50 51 49 47 58 58 47 47 58 58 48 50 34 39 47 47 58 58 58 54 49 40 29 35 53 58 54 58 54 51 37 48 50 51 51 58 58 58 58 48 49 58 54 52 49 49 51 50 50 40 43 50 52 58 58 58 54 50 39 58 46 39 58 38 49 52 51 58 51 37 54 51 50 58 41 58 58 49 58 43 43 25 58 50 50 54 58 37 37 23 58 39 39 52 50 58 41 50 58 39 36 52 42 54 42 42 42 32 33 22 23 22 32 45 40 31 52 54 37 39 38 52 53 32 49 42 51 39 18 40 40 54 42 53 41 27 49 39 23 51 40 52 51 40 32 40 33 34 53 33 40 34 35 36 39 30 30 40 32 53 52 35 35 41 40 45 42 40 45 39 32 42 6 49 13 17 49 26 31 40 29 31 33 52 31 32 41 47 36 45 40 30 15 49 49 41 33 31 31 25 52 31 24 35 41 18 33 14 18 41 45 26 30 40 17 27 29 45 43 30 38 24 22 32 22 31 46 34 31 41 37 40 28 24 29 25 28 18 48 27 23 41 46 14 22 25 27 38 25 41 30 33 41 20 23 8 30 31 18 46 31 34 31 36 29 32 33 27 34 32 16 28 31 11 11 31 19 22 30 28 46 16 25 37 21 31 28 31 26 19 36 25 27 31 21 31 41 25 24 17 21 35 38 32 28 27 28 22 36 23 7 26 25 14 6 17 25 48 44 30 43 44 41 24 31 13 21 31 31 27 30 32 43 41 19 21 33 33 34 26 20 14 28 29 19 33 22 19 21 15 19 32 27 34 17 10 14 32 19 28 12 19 27 32 18 14 11 11 18 20 11 4 4 24 8 9 14 18 4 4 4 24 18 12 33 17 14 15 14 13 13 12 29 16 26 28 19 28 20 27 10 28 47 22 6 3 4 12 8 27 13 8 27 40 22 24 28 13 20 29 27 27 8 27 8 4 10 9 21 5 7 10 21 11 17 7 21 30 7 25 30 21 6 16 6 9 15 4 6 7 17 4 5 20 7 19 5 23 9 2 5 4 13 8 18 9 11 7 5 11 22 21 26 9 7 7 9 27 13 13 14 17 16 7 3 7 3 1 14 9 9 3 2 8 4 22 8 17 11 5 18 7 12 5 10 4 14 4 7 16 13 6 20 9 6 4 15 25 8 6 9 5 7 4 6 6 4 10 5 4 4 1 2 2 3 8 5 7 4 2 3 5 7 5 5 5 3 2 13 4 8 5 14 1 1 2 2 11 7 5 5 4 9 3 2 4 18 6 5 14 10 22 6 6 6 4 4 7 12 26 28 16 6 8 3 8 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_64556388_64556518
seq2: B6Ng01-348B20.b_54_184

seq1  TCCAAAGCCTCATCATTTCATTAGGTAAAATAAATATTTTTTCCCAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGCCTCATCATTTCATTAGGTAAAATAAATATTTTTTCCCAATAT  50

seq1  CACAGGGGTTTGTTGTTATTTTGGATTTCTCCTCCTCCTCCTCCTCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGGTTTGTTGTTATTTTGGATTTCTCCTCCTCCTCCTCCTCCTCC  100

seq1  TCCTCCTCCTCTTCCTCCTCCTCCTCTTCCT  131
      |||||||||||||||||||||||||| ||||
seq2  TCCTCCTCCTCTTCCTCCTCCTCCTCCTCCT  131

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information