BAC Information

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BAC

Clone NameB6Ng01-348H16
Chromosome6 (Build37)
Map Location 61,003,662 - 61,004,776
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434019, LOC671300, EG627178, LOC100041706, LOC100041717, A530053G22Rik, LOC667066, LOC100041726, Snca, ENSMUSG00000064018, Mmrn1, LOC100041756
Downstream geneLOC100041764, C130092O11Rik, LOC100042694
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348H16.g
ACCGA129765
length1,111
definitionB6Ng01-348H16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatttagttgtgtgcatgtgtagggtgtgggttagagactaact
tagggaatctctccttcaggatattagattaagtggagagtgcttttacc
ctcactgagtcatctctccagcccctgaagttttaataataatgaaaaac
ttaaagtctattcatttcccacctcagtttccttgacatgccatgagacc
caatgcatgctctctctcacacagatccagttacaaaggtcatttggaga
acctactgttctactagtgaggactgggacccagaggagtgctttcctgt
cactccttgtctttttgtatgtgcttcttatggcctgatgacctagctga
cttcactgccataaaagatattcttggacaacaattccataatagatttt
aattgttgttgttatcattcttgttgttcttttgttgtgactgcatttct
gagagtttaaccaaaggcttcttatatgtttggcaaattctcccactgat
ctatcctgacaagttctcctaagttagtaaagctttataaataaacattt
gtaaacaggtagtgacaaataacattgggttcaatatatatctacaggaa
tatttatttttaatacttttaacatgttgcaattaaaagttggactccat
tctcttagtaaatctagccacaacttcacacatgggatttaataggactt
ctttttctgaacaactaaaatttgaaactggcattcaaactattcaaaat
gaagattacttttcacattatttttgttttattttgatctcaaaataatg
tatttttagtttcatacagccacaaaaatattattagtaagttccagttt
ttattgaccttaaatgtgagtagaagcagtttgtttttaaaacaggtgtt
gaaagaatatgtcttcatatagagatactgcctaggtatctgaactttac
ctatgttagcattttgtctaatctctgccccacagttacctgacaatgcc
aggtatgcctgattcactaataaaatggctgttgctccctcagctctgtc
ttgatctgtctctgcttcactgttcatttgaacccttccgatttctctgc
caatcccctca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_61003662_61004776
seq2: B6Ng01-348H16.g_63_1173

seq1  GAATTCTATTTAGTTGTGTGCATGTGTAGGGTGTGGGTTAGAGACTAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTAGTTGTGTGCATGTGTAGGGTGTGGGTTAGAGACTAACT  50

seq1  TAGGGAATCTCTCCTTCAGGATATTAGATTTAGTGGAGAGTGCTTTTACC  100
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGGGAATCTCTCCTTCAGGATATTAGATTAAGTGGAGAGTGCTTTTACC  100

seq1  CTCACTGAGTCATCTCTCCGGCCCCTGAAGTTTTAATAATAATGAAAAAC  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCACTGAGTCATCTCTCCAGCCCCTGAAGTTTTAATAATAATGAAAAAC  150

seq1  TTAAAGTCTATTCATTTCCCACCTCAGTTTCCTTGACATGCCATGTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTAAAGTCTATTCATTTCCCACCTCAGTTTCCTTGACATGCCATGAGACC  200

seq1  CAATGCATGCTCTCTCTCACACAGATCCAGTTACAAAGGTCATTTGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCATGCTCTCTCTCACACAGATCCAGTTACAAAGGTCATTTGGAGA  250

seq1  ACCTACTGTTCTACTAGTGAGGACTGGGACCCAGAGGAGTGCTTTCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTGTTCTACTAGTGAGGACTGGGACCCAGAGGAGTGCTTTCCTGT  300

seq1  CACTCCTTGTCTTTTTGTATGTGCTTCTTATGGCCTGATGACCTAGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTGTCTTTTTGTATGTGCTTCTTATGGCCTGATGACCTAGCTGA  350

seq1  CTTCACTGCCATAAAAGATATTCTTGGACAACAATTCCATAATAGATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGCCATAAAAGATATTCTTGGACAACAATTCCATAATAGATTTT  400

seq1  AATTGTTGTTGTTATCATTCTTGTTGTTCTTTTGTTGTGACTGCATTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTGTTGTTATCATTCTTGTTGTTCTTTTGTTGTGACTGCATTTCT  450

seq1  GAGAGTTTAACCAAAGGCTTCTTATATGTTTGGCAAATTCTCCCACTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTAACCAAAGGCTTCTTATATGTTTGGCAAATTCTCCCACTGAT  500

seq1  CTATCCTGACAAGTTCTCCTAAGTTAGTAAAGCTTTATAAATAAACATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTGACAAGTTCTCCTAAGTTAGTAAAGCTTTATAAATAAACATTT  550

seq1  GTAAACAGGTAGTGACAAATAACATTGGGTTCAATATATATCTACAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGGTAGTGACAAATAACATTGGGTTCAATATATATCTACAGGAA  600

seq1  TATTTATTTTTAATACTTTTAACATGTTGCAATTAAAAGTTGGACTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTTAATACTTTTAACATGTTGCAATTAAAAGTTGGACTCCAT  650

seq1  TCTCTTAGTAAATCTAGCCACAACTTCACACATGGGATTTAATAGGACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGTAAATCTAGCCACAACTTCACACATGGGATTTAATAGGACTT  700

seq1  CTTTTTCTGAACAACTAAAATTTGAAACTGGCATTCAAACTATTCAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTGAACAACTAAAATTTGAAACTGGCATTCAAACTATTCAAAAT  750

seq1  GAAGATTACTTTTCACATTATTTTTGTTTTATTTTGATCTCAAAATAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTACTTTTCACATTATTTTTGTTTTATTTTGATCTCAAAATAATG  800

seq1  TATTTTTAGTTTCATACAGCCACAAAAATATTATTAGTAAGTTCCAGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAGTTTCATACAGCCACAAAAATATTATTAGTAAGTTCCAGTTT  850

seq1  TTATTGACCTTAAATGTGAGTAGAAGCAGTTTGTTTTTAAAACAGGTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGACCTTAAATGTGAGTAGAAGCAGTTTGTTTTTAAAACAGGTGTT  900

seq1  GAAAGAATATGTCTTCATATAGAGATACTGCCTAGGTATCTGAACTTTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATATGTCTTCATATAGAGATACTGCCTAGGTATCTGAACTTTAC  950

seq1  CTATGTTAGCATTTTGTCTAATCTCTGCCCCACAGTTACCTGACAATGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTATGTTAGCATTTTGTCTAATCTCTGCCCCACAGTTACCTGACAAT-GC  999

seq1  CAGGTATGCCTGATTCACT-ATAAAATGGGCTGTTTGCTCCCTCAGCTCT  1049
      ||||||||||||||||||| ||||||| ||||| ||||||||||||||||
seq2  CAGGTATGCCTGATTCACTAATAAAAT-GGCTG-TTGCTCCCTCAGCTCT  1047

seq1  GTCTTGATCTTGTCTCTTGCTTCCACTGTCCTTTTGACCCTTCCCCGTTT  1099
      ||||||||| |||||| ||||| |||||| | ||||| || | ||  |||
seq2  GTCTTGATC-TGTCTC-TGCTT-CACTGTTCATTTGAACCCTTCCGATTT  1094

seq1  CTCTG-CATTCCCCTCA  1115
      ||||| || ||||||||
seq2  CTCTGCCAATCCCCTCA  1111