Query= MSMg01no052_g10.b1 MSMg01no052_g10.b1 CHROMAT_FILE:
MSMg01no052_g10.b1 PHD_FILE: MSMg01no052_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:00 2005
(673 letters)
>mm_chr6_114002023_114003095
Length = 1073
Score = 1164 bits (602), Expect = 0.0
Identities = 653/670 (97%), Gaps = 3/670 (0%)
Strand = Plus / Plus
Query: 6 ggaatt-caagtgaaatacatcctttcttccccaacttccttttggtcttggtgtgtcat 64
|||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattccaagtgaaataaaccctttcttccccaacttccttttggtcttggtgtgtcat 264
Query: 65 cacagtaatagtagctctaactacgacacatacatacttatttatgtcatattataatta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacagtaatagtagctctaactacgacacatacatacttatttatgtcatattataatta 324
Query: 125 taggagagagcaacagtttaagagagagagggagaatgggatgagttgcaggggagaggg 184
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 325 caggagagagcaacagtttaagagagggagggagaatgggaggagttgcaggggagaggg 384
Query: 185 aaggtgtaatgatgtaaatacactactcatgtagaaaattctcaaataaaattaaattcg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaggtgtaatgatgtaaatacactactcatgtagaaaattctcaaataaaattaaattca 444
Query: 245 tttaaaagaatcacacagtacccatactgccctcacatctttcttgtgatgatccatcca 304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttaaaagaatcacacagtagccatactgccctcacatctttcttgtgatgatccatcca 504
Query: 305 cttaggtttttcttcctccagccactgagcatcagtgctgttctggacattggttatcct 364
||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 505 cttaggtttttcttcctccagccaccgagcatcagtgctgttccgggcattggttatcct 564
Query: 365 tccctagagacagaggaggaaacaatataaaagttctgagttcctatatttacatgaatg 424
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 tccctagagacagaggaggaaacaagataaaagttctgagttcctatatttacatgaatg 624
Query: 425 agaaaa-tgagacataaaataaacatatcagtcaggtgaaaagctgagagaaaacataca 483
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agaaaaatgagacataaaataaacatatcagtcaggtgaaaagctgagagaaaacataca 684
Query: 484 gcaggataaagaaggacttccgtaggttaaatgagatagtgcatacctgaggtgcataat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcaggataaagaaggacttccgtaggttaaatgagatagtgcatacctgaggtgcataat 744
Query: 544 aagttctcagtaagtgtttgatgaccaatattcaccacagtccttattgctcctcctcct 603
||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 745 aagttctcagtaaatgtttgatgatcaatattcaccacagtccttattgctcctcctc-t 803
Query: 604 ctccacctttttctctaaccatttgttcagtgattcggttagcaagtcttcactgctatc 663
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 804 ctccacctttttctctaaccatttgttcggtgattcggttagcaagtcttcactgctatc 863
Query: 664 ttctcaaggc 673
||||||||||
Sbjct: 864 ttctcaaggc 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_g10.g1 MSMg01no052_g10.g1 CHROMAT_FILE:
MSMg01no052_g10.g1 PHD_FILE: MSMg01no052_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:00 2005
(392 letters)
>mm_chr6_114144136_114144927
Length = 792
Score = 735 bits (380), Expect = 0.0
Identities = 386/388 (99%)
Strand = Plus / Minus
Query: 1 cgggagaggtcagggtacagatagaacttgatgccttcagaggcgcctggcaacgtgacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cgggagaggtcagggtacagatagaacttgatgccttcagaggcgcctggcaacgtgacc 529
Query: 61 cctcggatcaggaggatcagcagcatgatgtaggggaaggttgcagtgacatacacgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cctcggatcaggaggatcagcagcatgatgtaggggaaggttgcagtgacatacacgacc 469
Query: 121 tgcccgggagaagagagacaagaggtaggcaggggtggtagtagtgggcttatttcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tgcccgggagaagagagacaagaggtaggcaggggtggtagtagtgggcttatttcactc 409
Query: 181 agcacagctccctccccagccggcacaccaccctttctggaagctgccctgaaactaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agcacagctccctccccagccggcacaccaccctttctggaagctgccctgaaactaact 349
Query: 241 agatgcatggaccatgctgtatccatctacacagcccagtctcagaaagacagttggctc 300
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agatgcatgaaccatgctgtgtccatctacacagcccagtctcagaaagacagttggctc 289
Query: 301 tgagcatcctcagggtcttgtttccatagctgccagtagccatggatgctcatgcctctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tgagcatcctcagggtcttgtttccatagctgccagtagccatggatgctcatgcctctc 229
Query: 361 atatcaaacggccctcaagacatctgca 388
||||||||||||||||||||||||||||
Sbjct: 228 atatcaaacggccctcaagacatctgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
