Query= MSMg01no053_f01.b1 MSMg01no053_f01.b1 CHROMAT_FILE:
MSMg01no053_f01.b1 PHD_FILE: MSMg01no053_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:11 2005
(320 letters)
>mm_chr17_95246769_95247488
Length = 720
Score = 559 bits (289), Expect = e-164
Identities = 298/301 (99%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 21 taaactgaaattctatacaaaa-aaatactaactcttcacatctccctaacatagccctt 79
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 711 taaactgaaattctatacaaaacaaatactaactcttcacatctccctaacatagccctt 652
Query: 80 ggcaaccaccatgctactttccattgctaccaatttgatgtctctaggctccttgtacaa 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ggcaaccaccatgctactttccattgctaccaatttgatgtctctaggctccttgtacaa 592
Query: 140 ataaaatcatatttgtcttttggcaactgggttatttcattttatataaaaatccatcta 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ataaaatcatatttgtcttttggcaactgggttatttcattttatataaaaatccatcta 532
Query: 200 tgttttggtattgccacagcttttagtatgaattatgatgttccatttgtatatagtgtg 259
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 531 tgttttggtattgccacagcttttagtctgaattatgatgttccatttgtatatagtgtg 472
Query: 260 tattcatgtatggttgcatgcatctcttgaccaaatatcgaccttgagtactgttcctca 319
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 471 tattcatgtatggttgcatgcatctcttgaccaaatattgaccttgagtactgttcctca 412
Query: 320 g 320
|
Sbjct: 411 g 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_f01.g1 MSMg01no053_f01.g1 CHROMAT_FILE:
MSMg01no053_f01.g1 PHD_FILE: MSMg01no053_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:11 2005
(327 letters)
>mm_chr6_17797211_17797936
Length = 726
Score = 617 bits (319), Expect = 0.0
Identities = 325/327 (99%), Gaps = 1/327 (0%)
Strand = Plus / Minus
Query: 1 atatcttttgtttttaataaatacttgctgttagaaaatatattttgcaatttctatttt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 526 atatcttttgtttttaataaatacttgctgttagaaaacatattttgcaatttctatttt 467
Query: 61 atggccaggccatcctgaatgtacctgttcccatctgaagtgactctcagttctttattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atggccaggccatcctgaatgtacctgttcccatctgaagtgactctcagttctttattc 407
Query: 121 cttctataacatctaatttctattcaacatgttccaaaacatttgctacgagtgcagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cttctataacatctaatttctattcaacatgttccaaaacatttgctacgagtgcagaat 347
Query: 181 atgtgaaagtttaaactatgcagagcaagtgaaccgaggtaaactgccatagaattttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atgtgaaagtttaaactatgcagagcaagtgaaccgaggtaaactgccatagaattttgc 287
Query: 241 ttgacacggatatttgtgactcaacttccctgaaaatctagcttttatgtatcagagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttgacacggatatttgtgactcaacttccctgaaaatctagcttttatgtatcagagaag 227
Query: 301 cttgtgaatatattggnaagaagctta 327
|||||||||||||||| ||||||||||
Sbjct: 226 cttgtgaatatattgg-aagaagctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 726
Length adjustment: 9
Effective length of query: 318
Effective length of database: 717
Effective search space: 228006
Effective search space used: 228006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
