XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTAATTCTCACTAGTCAGATACTCTTCCTCCTCCTCCTCCTCCTCC
TCCACCTCCTCTTCCTCCTCCTCCTCTTCCTTCTCCTTCTTCTGCCTCTC
TCTCTCTCTGTGTGTGTATTTGTGTATGGCTGTAATGGGGATATGGGGAT
AGAACCTAGAGCCTTGGGCTTAGTAACCAAATACTCTGCTAGTGAGCCAC
ACCCCAGCTCCTGCTTTTAAATCTTACGTTTTGTTTGTTTGTTTGTTTGT
TTGCTTGTTTTGCCTGATTGTTAGTGCTCAGGGACCTGGACCTTCACTCT
CAGGACACTGAGCTTTCTTTGTTATCTTCTGTCATTTACTATGTGAAGAG
GAGGAGGAAGAAGAAGAGAAGGAGGAGGAGGAAGAGTATCATTTCACTCC
TACTCCTTTGTGAATAAGCAATTATTGCTTCTAAAATATACAGGATTTAA
ACTTCATTATGAATATTATGTCACACCAAGCATAGTCTTGGGTTACAGTT
GTGGATTAAGTATCATGAGCCCATGACCTTATTATGAACCACAAGCCCTA
GCAAGACTGGAGCAACTTGTTTTTACCACTTACCGGTATATGTTTTTCCT
TATAGACTTCCTAGGGATATGTTTTAAGGGTCCTCTGGGGTACCGTATTA
GCTTTN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAAATAAAACTGATTTCATTTGCC
TTGAATAATGACAAAAGGAAGGACATCTAGCAGATTTCAATAGACTTCAA
GTATTCAATAGATCCTCATCTAAACAGTCCTGAGATCATGGTGGCAGATA
CAAGAAGAGAAGTTGGAATTCTTGATGAAATTATTTACCAGCCCAGAAGA
TTCACGACAGACTTGGAAGCTTGCTGGGCTAAGTCAAATAGAGCCACGAA
TCTCTCAGCAGCAGCATAAACCCTTTAGTGTATGAGGGTAAGCAAAGCAA
CATGAATCCTAACTGCTTGTGCCAATGTGTAACAATGGTTGGTATAGGGC
TGGACAATGCAAGCACGGGGACCTCGCTTTGATTCCCAGAACATACAGAA
AAACTAGGTTCAGTAGCAATCATAACCTGAGCACTGGGGGGGGGGGGGAG
AGGAGGATCTCCGTCCTTTGTCCGCCTCCGCCCCTTTTTTTTTCCGCCCA
CTTTTTCTTTTTTTTCCCCCTTTTTTTCCTATCTCCCCCATTTTCTTTAA
TCCCCTGTTCGTCCTTCCTTCTCTTTCCCTCCTTTTTTTTACCCTTGTTT
TTTTCCCCCTCTTTCTTTTCCTTCCATTTACTAACCCCCTTTTTCCCTTC
TTTACCCCTCCGCCTCCTGCTTATTCTCCCCCGCGATATTTTTCTCTTTT
CTTTN

Query= MSMg01no055_j17.g1 MSMg01no055_j17.g1 CHROMAT_FILE:
MSMg01no055_j17.g1 PHD_FILE: MSMg01no055_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:03 2005
         (431 letters)



>mm_chr6_95195546_95196377
          Length = 832

 Score =  721 bits (373), Expect = 0.0
 Identities = 415/435 (95%), Gaps = 14/435 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaataaaactgatttcatttgccttgaataatgacaaaaggaaggacatctagcagattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaataaaactgatttcatttgccttgaataatgacaaaaggaaggacatctagcagattt 381

                                                                       
Query: 61  caatagacttcaagtattcaatagatcctcatctaaacagtcctgagatcatggtggcag 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caatagacttcaagtattcagtagatcctcatctaaacagtcctgagatcatggtggcag 321

                                                                       
Query: 121 atacaagaagagaagttggaattcttgatgaaattatttaccagcccagaagattcac-g 179
           | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 320 acacaagaagagaagttggaattcttgatgaaattatttaccagcccagaagattc-ctg 262

                                                                       
Query: 180 acagacttggaagcttgctgggctaagtcaaatagagccacgaatctct-------cagc 232
           | ||||||||||||||||||||||||||| |||||||||||||||||||       ||||
Sbjct: 261 agagacttggaagcttgctgggctaagtcgaatagagccacgaatctctcaagcagcagc 202

                                                                       
Query: 233 agcagcataaaccctttagtgtatgagggtaagcaaagcaacatgaatcctaactgcttg 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagcataaaccctttagtgtatgagggtaagcaaagcaacatgaatcctaactgcttg 142

                                                                       
Query: 293 tgccaatgtgtaacaatggttggtatagggctggacaatgcaagcacggggacctcgctt 352
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tgccaatgtgtaacaatggttggtatagggctggacaatgcaagcacggggacctcgctt 82

                                                                       
Query: 353 tgattcccagaacatacagaaaaactaggttcagta----gcaatcataacctgagcact 408
           ||||||||||||||||||||||||||||| ||||||    ||||||||| ||||||||||
Sbjct: 81  tgattcccagaacatacagaaaaactaggctcagtagcatgcaatcatagcctgagcact 22

                          
Query: 409 ggggg-gggggggga 422
           ||||| |||||||||
Sbjct: 21  gggggagggggggga 7


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space:   347306
Effective search space used:   347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)