Query= MSMg01no063_n12.b1 MSMg01no063_n12.b1 CHROMAT_FILE:
MSMg01no063_n12.b1 PHD_FILE: MSMg01no063_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:22 2005
(250 letters)
>mm_chr6_128791440_128792089
Length = 650
Score = 282 bits (146), Expect = 1e-80
Identities = 227/258 (87%), Gaps = 11/258 (4%)
Strand = Plus / Plus
Query: 1 tgaggttgctaggagaat-t-tgttttgcctctatttcattccacgatctacaggcacaa 58
|||||||||| |||| | | |||||||||||||||||||||||| ||| ||||||| |
Sbjct: 201 tgaggttgcttggag--tctctgttttgcctctatttcattccacaatccacaggcatat 258
Query: 59 ggtagctttggccatgttgtctgctgtgataacgagaataagggaaattacatcctggtt 118
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 259 ggtagctttggccatgttgtctgctgtgataaagagaataagggaaattacaccctggtt 318
Query: 119 cttaaaacacccagcagtaaggtactcttaatagttgagt----tgac---ttcagtagt 171
|||||| | ||||||||||||||| ||||||||||| ||| |||| | |||||||
Sbjct: 319 cttaaagcgcccagcagtaaggtattcttaatagttcagtgcattgacgactacagtagt 378
Query: 172 cacatgccatgcctggattcatgagcatgtggcaatattcctctgtcacctctgttatgt 231
||||||||||||||||||| ||| ||||||||||||| |||| || |||||||||| |
Sbjct: 379 cacatgccatgcctggatttatgggcatgtggcaatagtcctaggtggcctctgttatct 438
Query: 232 tcagatgtcaagggccct 249
||||||||||||||||||
Sbjct: 439 tcagatgtcaagggccct 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_n12.g1 MSMg01no063_n12.g1 CHROMAT_FILE:
MSMg01no063_n12.g1 PHD_FILE: MSMg01no063_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:22 2005
(288 letters)
>mm_chr6_128797954_128798642
Length = 689
Score = 485 bits (251), Expect = e-141
Identities = 278/287 (96%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 ctgtatatttgaaaggaagtctccagttctctcccaccaatcagtctgtctgtctgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgtatatttgaaaggaagtctccagttctctcccaccaatcagtctgtctgtctgtctg 385
Query: 61 tctgtgtataagcatgcatgctttctgtgtcagtctcagatcctcacttctcatgcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctgtgtataagcatgcatgctttctgtgtcagtctcagatcctcacttctcatgcaagc 325
Query: 121 actcta-ccccctgagaaacaacttgagaccctccatttccacatttcccatctctgtct 179
|||||| |||||||||||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 324 actctagccccctgagaaacaacttgagatcttccatctccacatttcccatctctgtct 265
Query: 180 gaaatgactgcagccctgccatgttccttgattgaatacttgaagaaactagggcgagag 239
||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||
Sbjct: 264 gaaatgactccagccctgctatgttccttgattgaagacttgaagaaactagggtgagag 205
Query: 240 tagccagctcagctaccccacacttctgacctgcaggctcttgtata 286
||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 204 tagccagctcagctatcccacacttctgacctgcaggctcttgtata 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
