Query= MSMg01no063_n14.b1 MSMg01no063_n14.b1 CHROMAT_FILE:
MSMg01no063_n14.b1 PHD_FILE: MSMg01no063_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:22 2005
(271 letters)
>mm_chr6_103629159_103629830
Length = 672
Score = 487 bits (252), Expect = e-142
Identities = 264/268 (98%), Gaps = 1/268 (0%)
Strand = Plus / Minus
Query: 5 gaattcatctaatctttttcagggtcatcagagaaag-attctcatttcctgttcttgcc 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 472 gaattcatctaatctttttcagggtcatcagagaaagaattctcatttcctgttcttgcc 413
Query: 64 aatccatgaatctcagaacagagcctctggggaaacaacagagacatgcaaagctataga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aatccatgaatctcagaacagagcctctggggaaacaacagagacatgcaaagctataga 353
Query: 124 gaaagtcctcatggacaggcatctcatgcaggataactaggaatcaaggtgagttcagct 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ggaagtcctcatggacaggcatctcatgcaggataactaggaatcaaggtgagttcagct 293
Query: 184 gtccagttgagtctttgcctttcaaacctctcctctcctcacctatatttatcaactgat 243
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtccagttgagtctttgcctttccaacctctcctctcctcacctatatttatcaactgat 233
Query: 244 gtaggaagcttcaagtattttgtagttc 271
|||||||| |||||||||||||||||||
Sbjct: 232 gtaggaagtttcaagtattttgtagttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 672
Length adjustment: 9
Effective length of query: 262
Effective length of database: 663
Effective search space: 173706
Effective search space used: 173706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_n14.g1 MSMg01no063_n14.g1 CHROMAT_FILE:
MSMg01no063_n14.g1 PHD_FILE: MSMg01no063_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:22 2005
(230 letters)
>mm_chr6_103478856_103479485
Length = 630
Score = 339 bits (175), Expect = 1e-97
Identities = 187/191 (97%)
Strand = Plus / Plus
Query: 38 tctgcctttttttaaaccaacagctaatattttgctgtatttatcacagtgtaatttgat 97
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 238 tctgcctttttttaaaccaacagctaattttttgctgtatttattacagtgtaatttgat 297
Query: 98 atcctttgataaaaccttatggtgtggtaaaatgtgacatatgtataatttatactctag 157
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 298 atcctttgataaaaccttatggtgtggtaaaacgtgacatatgtataatttattctctag 357
Query: 158 ttgtgaaaggttttacccctgttgcataaagctagagcctctctaagttggagtctggtc 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttgtgaaaggttttacccctgttgcataaagctagagcctctctaagttggagtctggtc 417
Query: 218 agagaaaccaa 228
|||||||||||
Sbjct: 418 agagaaaccaa 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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