Query= MSMg01no066_b12.b1 MSMg01no066_b12.b1 CHROMAT_FILE:
MSMg01no066_b12.b1 PHD_FILE: MSMg01no066_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:46 2005
(260 letters)
>mm_chr6_124730976_124731638
Length = 663
Score = 416 bits (215), Expect = e-121
Identities = 251/263 (95%), Gaps = 3/263 (1%)
Strand = Plus / Minus
Query: 1 caggccatcctgggctacatggtgacattttgactcaaaatatcatttttaatttatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 caggccatcctgggctacatggtgacattttgactcaaaatatcatttttaatttatttt 444
Query: 61 ctcaccataacctcagtactgagaacacggggtggaatggggtgagggaggggcagggat 120
||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 443 ctcgccataacctcagtactgagaacacggggtggaaaggggtgggggaggggcagggat 384
Query: 121 ttgtttactac-gggtcaaccaagtgcaaaaccacttacattg-ttttttttg-aaaact 177
|||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 383 ctgtttactaccgggtcaaccaagtgcaaaaccacttacattggttttttttggaaaact 324
Query: 178 ctctaattctttgagataaatgctgtttcattttgaagtagcccaggctagcccagaaca 237
|||||||||||||||||||| ||||||||||||||||||||||| | |||||||||| ||
Sbjct: 323 ctctaattctttgagataaacgctgtttcattttgaagtagccctgcctagcccagacca 264
Query: 238 ttcttctgcttcagcttacagac 260
|||| ||||||||||||||||||
Sbjct: 263 ttctcctgcttcagcttacagac 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 663
Length adjustment: 9
Effective length of query: 251
Effective length of database: 654
Effective search space: 164154
Effective search space used: 164154
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_b12.g1 MSMg01no066_b12.g1 CHROMAT_FILE:
MSMg01no066_b12.g1 PHD_FILE: MSMg01no066_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:47 2005
(163 letters)
>mm_chr6_124614180_124614742
Length = 563
Score = 315 bits (163), Expect = 7e-91
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 1 agtgatcagagactcgattcagtaggtttttaagtccttggaacttttggggaaggctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgatcagagactcgattcagtaggtttttaagtccttggaacttttggggaaggctgc 260
Query: 61 ataactttaacctgagagaggcgtaagtagagggttaactgtaggaagtttgagataaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataactttaacctgagagaggcgtaagtagagggttaactgtaggaagtttgagataaat 320
Query: 121 tgggtgtggtgacttatgcctttgcggctcagtgccctgggac 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggtgtggtgacttatgcctttgcggctcagtgccctgggac 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 563
Length adjustment: 8
Effective length of query: 155
Effective length of database: 555
Effective search space: 86025
Effective search space used: 86025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
