Query= MSMg01no066_h06.b1 MSMg01no066_h06.b1 CHROMAT_FILE:
MSMg01no066_h06.b1 PHD_FILE: MSMg01no066_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:15 2005
(336 letters)
>mm_chr6_102707123_102707858
Length = 736
Score = 650 bits (336), Expect = 0.0
Identities = 336/336 (100%)
Strand = Plus / Minus
Query: 1 tctagcaataggcaacctgtgggcttaaatttgttggagtaaatttctgattttttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tctagcaataggcaacctgtgggcttaaatttgttggagtaaatttctgattttttcctt 477
Query: 61 tcttttaacttttttttcagattaaatttagaatttgaatctcttgccatttgcctgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tcttttaacttttttttcagattaaatttagaatttgaatctcttgccatttgcctgtca 417
Query: 121 tatttcacttactaccatttttggtgagaaaacgagttaaagatctttagcaactacaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tatttcacttactaccatttttggtgagaaaacgagttaaagatctttagcaactacaat 357
Query: 181 tagagtcatcttttatctatcttgaattcattatgctattaaaatattggcattgaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tagagtcatcttttatctatcttgaattcattatgctattaaaatattggcattgaataa 297
Query: 241 agtatcatctaagatgaaatataatatacaatgcaaacaactatttatctgtgttatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agtatcatctaagatgaaatataatatacaatgcaaacaactatttatctgtgttatgga 237
Query: 301 taaatcaatagttttattatcaaaactgttgtaata 336
||||||||||||||||||||||||||||||||||||
Sbjct: 236 taaatcaatagttttattatcaaaactgttgtaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_h06.g1 MSMg01no066_h06.g1 CHROMAT_FILE:
MSMg01no066_h06.g1 PHD_FILE: MSMg01no066_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:15 2005
(240 letters)
>mm_chr6_102534859_102535498
Length = 640
Score = 400 bits (207), Expect = e-116
Identities = 227/237 (95%), Gaps = 6/237 (2%)
Strand = Plus / Plus
Query: 4 gaattcagtatctgttacccgctttctattggtggctcctaactcttcctgacttgacat 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcagtatctgttacctgctttctattggtggctcctaactcttcctgacttgacat 263
Query: 64 tctctcagactctattctatctgacagagactgcccctcaacagttccaacagagatacg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 264 tctctcagactctattctatctgacagagactgcccctcaacagttccaacagagatatg 323
Query: 124 aatgaaagatgcctaaagactaacatcagtctatcttagattctttctctgctggcaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatgaaagatgcctaaagactaacatcagtctatcttagattctttctctgctggcaaag 383
Query: 184 agagagggtgttgtgactaacaagtcttgtgtcagtccttggtgtccctgctacaaa 240
||||||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 384 agagaggatgttgtgactaacaagtcttgtgtcagtact------ccctgctacaaa 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
