Query= MSMg01no066_j11.b1 MSMg01no066_j11.b1 CHROMAT_FILE:
MSMg01no066_j11.b1 PHD_FILE: MSMg01no066_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:26 2005
(397 letters)
>mm_chr6_36754057_36754855
Length = 799
Score = 716 bits (370), Expect = 0.0
Identities = 388/394 (98%), Gaps = 2/394 (0%)
Strand = Plus / Plus
Query: 6 gaattctctctttactctc-aagttatcaagtcagaaaccatgttgatgtaaaggatgaa 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctctctttactctcgaagttatcaagtcagaaaccatgttgatgtaaaggatgaa 265
Query: 65 ggtaggtggggtatagaagactaaaccctgcagaccaacaggatccctcaaatgaaagca 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gggaggtggggtatagaagactaaaccctgcagaccaacaggatccctcaaatgaaagca 325
Query: 125 ggaaagtgatacttggagacatttgctctggaagcctgaggagatcggtaataatacatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggaaagtgatacttggagacatttgctctggaagcctgaggagatcggtaataatacatg 385
Query: 185 atgtttattgtaaggtaggaggaatgggtaaaggacattgtgggactggatcatgattag 244
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 386 atgtttattggaaggtaggaggaatgggtaaaggacattgtgggattggatcatgattag 445
Query: 245 caaagaaaatggatagtcttcagggttgtctatcttttatttgcttctcagccttctgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 caaagaaaatggatagtcttcagggttgtctatcttttatttgcttctcagccttctgtg 505
Query: 305 aagcatctctgatgggcttttgcccatcagataatgtaaggttctagagtggaggaagac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aagcatctctgatgggcttttgcccatcagataatgtaaggttctagagtggaggaagac 565
Query: 365 cggcctttcctt-aagagggtctagtgctgtggc 397
| |||||||||| |||||||||||||||||||||
Sbjct: 566 cagcctttcctttaagagggtctagtgctgtggc 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 799
Length adjustment: 9
Effective length of query: 388
Effective length of database: 790
Effective search space: 306520
Effective search space used: 306520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_j11.g1 MSMg01no066_j11.g1 CHROMAT_FILE:
MSMg01no066_j11.g1 PHD_FILE: MSMg01no066_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:26 2005
(477 letters)
>mm_chr6_36912931_36913807
Length = 877
Score = 756 bits (391), Expect = 0.0
Identities = 436/451 (96%)
Strand = Plus / Minus
Query: 1 cagaggtcgtgggacagatttgagcaggacactccatgcctagaaacaacatgctggcta 60
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 464 cagaggtcgtgggacagatttgagcgggacacttcatgcctagaaacaacatgctggcta 405
Query: 61 tctgactatgcttgaaataatttatgtaacacataacaaaatccttgaaacttttcatct 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tccgactatgcttgaaataatttatgtaacacataacaaaatccttgaaacttttcatct 345
Query: 121 ccttttatcaactggatgaagtagatctatctagaactgttgtgtatccttgtgttcaac 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 344 ccttttatcaactggatgaagtagatctatctagaactgttgtgtatcctagtgttcaac 285
Query: 181 ttgagaagaagcccctaagattttctttgtgtttttagattttcaaattagatttattta 240
| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 284 tagaaaagaagcccctaagattttctttgtgtttttagattttcaaattagaattattta 225
Query: 241 tctgtgggtgatagggtagagttggcatatgtgttatggagagcatatgaaggtcagaga 300
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 224 tctgtgggtgagagggtagagttggcatatgtgttatggagagtatatgaaggtcagaga 165
Query: 301 acaacttgcaggaatcagatctctcctttcctcatggagactcaagggatgcaactcatg 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 164 acaacttgcaggaatcagatctctcctttcctcatggagattcaagggatgcaactcatg 105
Query: 361 attgaagataggcatttttaccctctcagccatccccttggcccactgtatgttttgatc 420
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || |||
Sbjct: 104 attgaagataggcatttttacccactcagccatccccttggcccactctatgtcttcatc 45
Query: 421 tgacctcttactacctaggaagataagacta 451
|||||||||||||||||||||||| ||||||
Sbjct: 44 tgacctcttactacctaggaagattagacta 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
