Query= MSMg01no068_h18.b1 MSMg01no068_h18.b1 CHROMAT_FILE:
MSMg01no068_h18.b1 PHD_FILE: MSMg01no068_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:56 2005
(247 letters)
>mm_chr6_136640417_136641064
Length = 648
Score = 472 bits (244), Expect = e-138
Identities = 247/248 (99%), Gaps = 1/248 (0%)
Strand = Plus / Minus
Query: 1 gttcgtcc-cacagaatctctgcttgcatgagcataggaaaaggtatgcacgcttatcta 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gttcgtccacacagaatctctgcttgcatgagcataggaaaaggtatgcacgcttatcta 389
Query: 60 acacatcaagggtggtgtacttattagttgagatttcccacttctggttctgacccgagt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 acacatcaagggtggtgtacttattagttgagatttcccacttctggttctgacccgagt 329
Query: 120 tctattttctcattggtatcatgtgccaagcagctgccacgccctccctcaaaccagcat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tctattttctcattggtatcatgtgccaagcagctgccacgccctccctcaaaccagcat 269
Query: 180 gggtggagccttctgccatgccttttccaccgcaatggttgtagccattcctgcacgatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gggtggagccttctgccatgccttttccaccgcaatggttgtagccattcctgcacgatc 209
Query: 240 aggagtgt 247
||||||||
Sbjct: 208 aggagtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 648
Length adjustment: 9
Effective length of query: 238
Effective length of database: 639
Effective search space: 152082
Effective search space used: 152082
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_h18.g1 MSMg01no068_h18.g1 CHROMAT_FILE:
MSMg01no068_h18.g1 PHD_FILE: MSMg01no068_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:56 2005
(130 letters)
>mm_chr6_136504223_136504752
Length = 530
Score = 244 bits (126), Expect = 2e-69
Identities = 129/130 (99%)
Strand = Plus / Plus
Query: 1 agtggctttgttgcaaaaaaccaacttgacttgggttatatttatttgtactaagtgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agtggctttgttgcaaaaaaccaacttgacttgggttatatttatttgtattaagtgtta 260
Query: 61 tttggtagagagaatttagtaatagtgtttgtttacactggcttactatattttcaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttggtagagagaatttagtaatagtgtttgtttacactggcttactatattttcaaata 320
Query: 121 tctctcacac 130
||||||||||
Sbjct: 321 tctctcacac 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 130
Length of database: 530
Length adjustment: 8
Effective length of query: 122
Effective length of database: 522
Effective search space: 63684
Effective search space used: 63684
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
