Query= MSMg01no069_d14.b1 MSMg01no069_d14.b1 CHROMAT_FILE:
MSMg01no069_d14.b1 PHD_FILE: MSMg01no069_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:55 2005
(286 letters)
>mm_chr6_119435998_119436683
Length = 686
Score = 514 bits (266), Expect = e-150
Identities = 281/290 (96%), Gaps = 8/290 (2%)
Strand = Plus / Minus
Query: 1 agagcgagaccctggctcagagaacaacaataactaaaagcaaaactttccttccttgct 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 486 agagcgagaccctggctcagagaacaacaataactaaaagcaaaactttctttccttgct 427
Query: 61 tgtaaagtgagtacactctctgggctaacttacggcagccaagatactggaaattgccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgtaaagtgagtacactctctgggctaacttacggcagccaagatactggaaattgccgt 367
Query: 121 tttgttggcataagggttaagtggctccctcagatgcagatgtactgtggcagtaatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tttgttggcataagggttaagtggctccctcagatgcagatgtactgtggcagtaatgtc 307
Query: 181 acctcaatggaagacagggtttgcagagtaccatacatgctgggtggctacaggcagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 acctcaatggaagacagggtttgcagagtaccatacatgctgggtggctacaggcagttc 247
Query: 241 cacctg----ttttgaccgaagtgatccctggcaaggaggaagaggctga 286
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 246 cacctggcaa----gaccgaagtgatccctggcaaggaggaagaggctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_d14.g1 MSMg01no069_d14.g1 CHROMAT_FILE:
MSMg01no069_d14.g1 PHD_FILE: MSMg01no069_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:55 2005
(109 letters)
>mm_chr6_119270276_119270784
Length = 509
Score = 195 bits (101), Expect = 5e-55
Identities = 107/109 (98%)
Strand = Plus / Plus
Query: 1 ccgaaggttgcagtcacactcccacgggttgtccccaacctgaagcacctgcaggtttgc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 201 ccgaaggttgcagtcacactcccacgggttgtccccaacctgaagcagctgcaggcttgc 260
Query: 61 caggggctcgaacgtcagccggtccaggctctgcagacgattggagcgg 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggggctcgaacgtcagccggtccaggctctgcagacgattggagcgg 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space: 50601
Effective search space used: 50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
