Query= MSMg01no069_p23.b1 MSMg01no069_p23.b1 CHROMAT_FILE:
MSMg01no069_p23.b1 PHD_FILE: MSMg01no069_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:54 2005
(415 letters)
>mm_chr6_111240225_111241038
Length = 814
Score = 735 bits (380), Expect = 0.0
Identities = 404/412 (98%), Gaps = 3/412 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcaagatctcctcgagtcctaactatagtttcg-aatggcatggcaaagtcct 63
|||||||||||||||| || |||||||||||||||| | | |||||||||||||||||||
Sbjct: 614 gaattcttcaagatct-cttgagtcctaactatagtct-gtaatggcatggcaaagtcct 557
Query: 64 ggcaacgactgctaagcagagcctgaccaaacattacatgaggtccattgtgagtttctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggcaacgactgctaagcagagcctgaccaaacattacatgaggtccattgtgagtttctg 497
Query: 124 tcactctttattcctgagtcagcttcgtcagtacataaccagattacaacaattcaaatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tcactctttattcctgagtcagcttcgtcagtacataaccagattacaacaattcaaatg 437
Query: 184 aaatgatacttcagccactccaggggaaggagaaagctgttgtaggaagaaagggtgggt 243
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 436 aaatgatacttcagccactccaggggaaggagaaagctgctgtaggaagaaagggtgggt 377
Query: 244 cactgaattctattagtgtgtgattctatggcaaaccctgatagttatttcatctattaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cactgaattctattagtgtgtgattctatggcaaaccctgatagttatttcatctattaa 317
Query: 304 tttctcttgcaaatctattggaagaaaaatggtttctactgctagttagaaaaatgagaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tttctcttgcaaatctattggaagaaaaatggtttctactgctagttagaaaaatgagaa 257
Query: 364 agcctctgaaattgatcctatcataaatatctccagatttacacctttgtaa 415
||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 256 agcctctgaaattgatcctatcacaaatatctccagattcacacctttgtaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 814
Length adjustment: 9
Effective length of query: 406
Effective length of database: 805
Effective search space: 326830
Effective search space used: 326830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no069_p23.g1 MSMg01no069_p23.g1 CHROMAT_FILE:
MSMg01no069_p23.g1 PHD_FILE: MSMg01no069_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:54 2005
(267 letters)
>mm_chr6_111082749_111083415
Length = 667
Score = 485 bits (251), Expect = e-142
Identities = 263/267 (98%)
Strand = Plus / Plus
Query: 1 cttgaagatattgcagacttggttgcagactgttaccctaaaacagattccttttttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cttgaagatattgcagacttggttgcagactgttaccctaaaacagattgcttttttaaa 260
Query: 61 ttctcagttcataaatatttttatacatacagtgttatcaattcaatgtgtcgattacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctcagttcataaatatttttatacatacagtgttatcaattcaatgtgtcgattacat 320
Query: 121 ctgaaaaaaatcccactccttaatttctactgttttattcttagaaatgctaatgattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaaaaaaatcccactccttaatttctactgttttattcttagaaatgctaatgattat 380
Query: 181 ctgggcctttagtcatttgagctttctttgctggcggtttgctggtggacatgctcactt 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ctgggcctttagtcatttgagctttctttgctggtggtttgctggtggacatgctcactt 440
Query: 241 gaatgttgtatactgataattgatcaa 267
|||||||| | ||||||||||||||||
Sbjct: 441 gaatgttggagactgataattgatcaa 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
