Query= MSMg01no070_p07.b1 MSMg01no070_p07.b1 CHROMAT_FILE:
MSMg01no070_p07.b1 PHD_FILE: MSMg01no070_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:12 2005
(241 letters)
>mm_chr6_51438917_51439557
Length = 641
Score = 439 bits (227), Expect = e-128
Identities = 239/245 (97%), Gaps = 4/245 (1%)
Strand = Plus / Minus
Query: 1 gtgcacgcctttaatcctagcacttgggagtcagaggcaggcagatttctgagtgggcta 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 585 gtgcacgcctttaatcctagcacttgggagtcagagacaggcagatttctgagtgggcta 526
Query: 61 cccagagaaactctgtctagaaaaacc----agagagagagagagagagagagagagaga 116
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 525 cccagagaaactctgtctagaaaaaccagagagagagagagagagagagagagagagaga 466
Query: 117 gagagagagagagagagagagagttagttagttcctggtcttctgtctggtgttaccatc 176
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 465 gagagagagagagagagagagagctagttagttcctggtcttctgtctggtgttaccatc 406
Query: 177 cactcaccccacgctatcatctcaagttaaacggtctcctttgctaagaaagcattttaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cactcaccccacgctatcatctcaagttaaacggtctcctttgctaagaaagcattttaa 346
Query: 237 ctcca 241
|||||
Sbjct: 345 ctcca 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no070_p07.g1 MSMg01no070_p07.g1 CHROMAT_FILE:
MSMg01no070_p07.g1 PHD_FILE: MSMg01no070_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:12 2005
(179 letters)
>mm_chr6_51281734_51282312
Length = 579
Score = 323 bits (167), Expect = 4e-93
Identities = 176/179 (98%)
Strand = Plus / Plus
Query: 1 cagaggacattctgtgactcgtgccaagactggccagtgacccccacttccagtttatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaggacattctgtgactcgtgccaagactggccagtgacccccacttccagtttatgc 260
Query: 61 tcttgagcagcggaatgggggatctgctatttgacagctattcagaaacattctacccat 120
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||
Sbjct: 261 tcttgagcagcggaatgggggatctgctatttgacagctatttagaaacaatctatccat 320
Query: 121 gcctggaccccacctcctgaatttccagtccagtggcttcaaaagtctgtccttcacag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctggaccccacctcctgaatttccagtccagtggcttcaaaagtctgtccttcacag 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
