Query= MSMg01no075_l03.b1 MSMg01no075_l03.b1 CHROMAT_FILE:
MSMg01no075_l03.b1 PHD_FILE: MSMg01no075_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:25 2005
(554 letters)
>mm_chr6_101788096_101789048
Length = 953
Score = 986 bits (510), Expect = 0.0
Identities = 540/550 (98%), Gaps = 1/550 (0%)
Strand = Plus / Plus
Query: 5 gaattccaagtaacaccaatgccagtgcccagtgcatgggaaataataacagttttggga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 205 gaattccaagtaacaccaatgccagtgcccagtgcatgggaaataataacagttttgtga 264
Query: 65 ggactgtagacttctttcaatttttataatatgctaggcactgggctgcaagttttatgc 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggactgtggacttctttcaatttttataatatgctaggcactgggctgcaagttttatgc 324
Query: 125 atacaatctcaattgatttgggaaaagaaaagaaataccgcttcccagaagtgcattcct 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 atacaatctcaattgatttgggaaaagaaaagaaataccgcttcccagaaatgcattcct 384
Query: 185 ttacaaaggggtgttgtgtaagaaagcctttagaaaaaatattcattaaccccctgaggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 ttacaaaggggtgttgtgtaagaaagcctttagaaaaaatattcattaacccc-tgaggg 443
Query: 245 actttggactgtataaagtatgtgtctagtttatgttctctcacatattaaaggagagga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actttggactgtataaagtatgtgtctagtttatgttctctcacatattaaaggagagga 503
Query: 305 ttaggctgaataaaattatatgtaattacatgaagacctgtatagaagagcagaaagcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttaggctgaataaaattatatgtaattacatgaagacctgtatagaagagcagaaagcag 563
Query: 365 caggacaagatccttctccctcagtcttctcagtctcaaactacatgcttgatagtttga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 564 caggacaagatccttctccctcagtcttctcagtctcaaactacatgcttgatagttcga 623
Query: 425 cttgagtttgttaattgttttccttatctattggcgctgtagtggtagtcattttttctc 484
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 624 ctttagtttgttaattgttttccttatctattggagctgtagtggtagtcattttttctc 683
Query: 485 ttcatttctgtcacatttttatcctatagtccaagatagtatatgtcttgtgtatcctct 544
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||
Sbjct: 684 ttcatttctgtcacatttttaccctataatccaagatagtatatgtcttgtgtatcatct 743
Query: 545 aaaggtactg 554
||||||||||
Sbjct: 744 aaaggtactg 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 953
Length adjustment: 10
Effective length of query: 544
Effective length of database: 943
Effective search space: 512992
Effective search space used: 512992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_l03.g1 MSMg01no075_l03.g1 CHROMAT_FILE:
MSMg01no075_l03.g1 PHD_FILE: MSMg01no075_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:25 2005
(266 letters)
>mm_chr6_101881271_101881936
Length = 666
Score = 433 bits (224), Expect = e-126
Identities = 227/228 (99%)
Strand = Plus / Minus
Query: 34 accaatatcatacagataccaagggacgactgaaatcataactatgaataaataaatata 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 accaatatcatacagataccaagggacgactgaaatcataactatgaataaataaatata 390
Query: 94 aagaagaatgacaaagaaaaagcatgaataataataagatgaagataagtctctgagatg 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aagaagaatgacaaagaaaaagcatgaataataataagatgaagataagtctctgagatg 330
Query: 154 agttgatctactcaagaatctttcatatcaatctagattcaactaccagacctgcaagta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agttgatctactcaagaatctttcatatcaatctagattcaactaccagacctgcaagta 270
Query: 214 ctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 261
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 266
Length of database: 666
Length adjustment: 9
Effective length of query: 257
Effective length of database: 657
Effective search space: 168849
Effective search space used: 168849
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
