Query= MSMg01no075_n02.b1 MSMg01no075_n02.b1 CHROMAT_FILE:
MSMg01no075_n02.b1 PHD_FILE: MSMg01no075_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:34 2005
(539 letters)
>mm_chr6_145532922_145533861
Length = 940
Score = 862 bits (446), Expect = 0.0
Identities = 509/530 (96%), Gaps = 2/530 (0%)
Strand = Plus / Plus
Query: 12 cttcctcttccc-tcccatagctgtgcatggtgctatcttaagtgatagctgtgcactgt 70
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cttcctcttcctatcccatagctgtgcatggtgctatcttaagtgatagctgtgcactgt 270
Query: 71 tactccttaatgtttccatttgccgttccctaatgacatgggatggtcagcatcacttca 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tactccttaatgtttccatttgccgttccctaatgacatgggatggtcagcatcacttca 330
Query: 131 ttcggtaggatatgaacaagcactagggaacgaatagcacgtgcatcatcatcttcgccg 190
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||
Sbjct: 331 ttcggtaggatatgaacaagtactagggaacgaatagcacgtgcgtcatcatctgcgccg 390
Query: 191 agtggcagcaccttatcagggctcttggtaaatactcttccaacagcaaagtgaaagtct 250
|||||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||
Sbjct: 391 agtggcagcaccttgtcagggctcttggtcaacactcttccaacagcaaagtgagagtct 450
Query: 251 tccaagcacagcgtgtgtctgaggcatctcagttcaaggacccattgtaacaccagcggg 310
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 451 tccaagcacagcgtgtgtctgaggcatctcagttcaaggacccattgtaacatcagcagg 510
Query: 311 tctctggtgttgtctctagaatgatgtgcgtaggttgatgtcttgctaagtaccatgtgt 370
|||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||
Sbjct: 511 tctctggtgtcgtctctagaatgatgtgagtagattgatgttttgctaagtaccatgtgt 570
Query: 371 agcattgtatttcacggaccaacacaaatattccttctagaccagtatatatcaacttgt 430
|||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 571 agcattgtatttcatggaacaacacaaatattccttctagaccagtatatataaactttt 630
Query: 431 ccctaagcatagccatccacaacagaaa-tgcatttctccatgatcttcagctcataaaa 489
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 631 ccctaagcatagccatccacaacaaaaaatgcatttctccatgatcttcagctcataaaa 690
Query: 490 ccatcagtgacagggagatgacacggtcatgatggcctgtgttgcatttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ccatcagtgacagggagatgacacggtcatgatggcctgtgttgcatttg 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 940
Length adjustment: 10
Effective length of query: 529
Effective length of database: 930
Effective search space: 491970
Effective search space used: 491970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_n02.g1 MSMg01no075_n02.g1 CHROMAT_FILE:
MSMg01no075_n02.g1 PHD_FILE: MSMg01no075_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:35 2005
(116 letters)
>mm_chr6_145658435_145658950
Length = 516
Score = 224 bits (116), Expect = 1e-63
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 1 tcaaaagtccatttgacttcctaccaagttcaccacggtttgtgcttcctctgccggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tcaaaagtccatttgacttcctaccaagttcaccacggtttgtgcttcctctgccggatc 257
Query: 61 aggtagaggcatccaggcgagtgctctgaagaccgctaaagggatgggagatgaca 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aggtagaggcatccaggcgagtgctctgaagaccgctaaagggatgggagatgaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 116
Length of database: 516
Length adjustment: 8
Effective length of query: 108
Effective length of database: 508
Effective search space: 54864
Effective search space used: 54864
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
