Query= MSMg01no076_b24.b1 MSMg01no076_b24.b1 CHROMAT_FILE:
MSMg01no076_b24.b1 PHD_FILE: MSMg01no076_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:59 2005
(353 letters)
>mm_chr6_85921452_85922204
Length = 753
Score = 580 bits (300), Expect = e-170
Identities = 327/338 (96%), Gaps = 8/338 (2%)
Strand = Plus / Minus
Query: 21 tctcttctt---acctgtttttt-aaatatttatttattatttatatgtaagtacactgt 76
||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 753 tctcttcttaaaa--tgttttttaaaatatttatttattatttatatgtaagtacactgt 696
Query: 77 agctgtcttcagacacaccagtagagggcatcagatgtcattact-gatggttgtaagcc 135
||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||
Sbjct: 695 agctgtcttcagacacaccagtagagggcgtcagatgtcatta-tggatggttgtaagcc 637
Query: 136 accatgtagtttttgggatttgaactcaggacctgcggaagaacagtcagttctcttaac 195
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 636 accatgtagtttttgggatttgaactcaggacctgtggaagaacagtcagttctcttaac 577
Query: 196 cactgagccatctctccagccccaaattctctcttctttacctgtgttccccagaggttc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cactgagccatctctccagccccaaattctctcttctttacctgtgttccccagaggttc 517
Query: 256 caatgctttctatggtgttcttatgggcagcataagaaatgagggcaaggtaatgaggaa 315
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 516 caatgctttctatggtgttcttatgggcagcagaagaaatgagggcaaggtaatgaggaa 457
Query: 316 caagcagagggctcaagcctcgggtactgtgaactgca 353
||||||||||||||||||||||||||||||||||||||
Sbjct: 456 caagcagagggctcaagcctcgggtactgtgaactgca 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_b24.g1 MSMg01no076_b24.g1 CHROMAT_FILE:
MSMg01no076_b24.g1 PHD_FILE: MSMg01no076_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:59 2005
(263 letters)
>mm_chr6_85796413_85797075
Length = 663
Score = 501 bits (259), Expect = e-146
Identities = 262/263 (99%)
Strand = Plus / Plus
Query: 1 caatgccagatggagcttgcttagaaggaacaagtgtcccttcagagatttgactgaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgccagatggagcttgcttagaaggaacaagtgtcccttcagagatttgactgaccc 260
Query: 61 acgataagagatgtagttttataatgatgcactggagtgtattacagatttgtaaaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgataagagatgtagttttataatgatgcactggagtgtattacagatttgtaaaagca 320
Query: 121 cctggaggaatgggaagcacaacagtttagacaatttgaacaatccctctccctctcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggaggaatgggaagcacaacagtttagacaatttgaacaatccctctccctctcccc 380
Query: 181 ttcccctccccctccctccctccctctttctccaaaacaaaacaaaaaatcaaaacaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcccctccccctccctccctccctctttctccaaaacaaaacaaaaaatcaaaacaagt 440
Query: 241 aaacaataatacaaaaaaatatc 263
||||||||| |||||||||||||
Sbjct: 441 aaacaataagacaaaaaaatatc 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
