MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-078D06
Chromosome	6 (Build37)
Map Location	66,208,656 - 66,209,052
singlet/doublet	singlet
Overlap gene	LOC100041916
Upstream gene	LOC634745, EG667141, C130060K24Rik, 9030611K07Rik, A930038C07Rik, LOC667160, Prdm5, 4930544G11Rik, Ppia-ps6_651.1
Downstream gene	Tpm3-rs3, LOC627751, Mad2l1, V1rc15, LOC100041941, Aurkb-ps, V1rc14, LOC546901, V1rc12, LOC627833, V1rc11, V1rc10, LOC100042816, LOC546902, V1rc13, EG546903, LOC100042008, 4930597O21Rik, Gng12, LOC100042837, Gadd45a, E230016M11Rik, EG667310, LOC667318
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC634745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:634745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	EG667141 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667141 MGI:3647865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein pseudo : _no_value

name	C130060K24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243407 MGI:2441881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9030611K07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414084 MGI:3041165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930038C07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68169 MGI:1915419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins pseudo : _no_value

name	Prdm5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70779 MGI:1918029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930544G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67653 MGI:1914903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Ppia-ps6_651.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545843
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 6_651.1 pseudo : _no_value

name	LOC100041916 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tpm3-rs3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110376 MGI:99709
definition	note : tropomyosin 3, related sequence 3 pseudo : _no_value

name	LOC627751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Mad2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56150 MGI:1860374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rc15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171188 MGI:2159451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041941 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Aurkb-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384398
definition	note : aurora kinase B pseudogene pseudo : _no_value

name	V1rc14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171187 MGI:2159450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	V1rc12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171185 MGI:2159444
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627833 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 ESTs, 4 Proteins pseudo : _no_value

name	V1rc11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171184 MGI:2159443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171183 MGI:2159442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042816 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042816
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 41 ESTs, 6 Proteins pseudo : _no_value

name	LOC546902 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546902
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 Proteins pseudo : _no_value

name	V1rc13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171186 MGI:2159445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG546903 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546903 MGI:3644802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 64 Proteins

name	LOC100042008 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 854 ESTs, 1 Protein

name	4930597O21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75373 MGI:1922623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs

name	Gng12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14701 MGI:1336171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042837 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins pseudo : _no_value

name	Gadd45a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13197 MGI:107799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E230016M11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320172 MGI:2443524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	EG667310 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667310 MGI:3647296
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 177 ESTs, 14 Proteins

name	LOC667318 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667318
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC634745 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255170 GeneID:634745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to zinc finger protein 533 transcript_id : XM_001477139.1

name	C130060K24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380917 GeneID:243407 MGI:2441881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C130060K24 gene transcript_id : NM_175524.3

name	9030611K07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665743 GeneID:414084 MGI:3041165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030611K07 gene transcript_id : NM_001001495.2

name	A930038C07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802440 GeneID:68169 MGI:1915419
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930038C07 gene transcript_id : NM_172399.2

name	Prdm5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286827 GeneID:70779 MGI:1918029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PR domain containing 5 transcript_id : NM_027547.2

name	LOC100041916 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255172 GeneID:100041916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041916 transcript_id : XM_001477206.1

name	Mad2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369937 GeneID:56150 MGI:1860374
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD2 (mitotic arrest deficient, homolog)-like 1 (yeast) transcript_id : NM_019499.3

name	V1rc15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381477 GeneID:171188 MGI:2159451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C15 transcript_id : NM_134170.3

name	LOC100041941 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255174 GeneID:100041941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041941 transcript_id : XM_001477238.1

name	V1rc14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717666 GeneID:171187 MGI:2159450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C14 transcript_id : NM_134169.1

name	LOC546901 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255177 GeneID:546901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to vomeronasal receptor V1RC10 transcript_id : XM_001477290.1

name	V1rc12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21699047 GeneID:171185 MGI:2159444
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C12 transcript_id : NM_134167.1

name	V1rc11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21699039 GeneID:171184 MGI:2159443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C11 transcript_id : NM_134166.1

name	V1rc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21699043 GeneID:171183 MGI:2159442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C10 transcript_id : NM_134165.1

name	V1rc13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717656 GeneID:171186 MGI:2159445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C13 transcript_id : NM_134168.1

name	EG546903 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82901211 GeneID:546903 MGI:3644802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 64 Proteins product : predicted gene, EG546903 transcript_id : XM_621716.2

name	LOC100042008 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255180 GeneID:100042008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 854 ESTs, 1 Protein product : similar to ribosomal protein L23 transcript_id : XM_001477371.1

name	4930597O21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255182 GeneID:75373 MGI:1922623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs product : RIKEN cDNA 4930597O21 gene transcript_id : XM_989547.2

name	Gng12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363813 GeneID:14701 MGI:1336171
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein (G protein), gamma 12 transcript_id : NM_025278.4

name	Gadd45a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6681148 GeneID:13197 MGI:107799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth arrest and DNA-damage-inducible 45 alpha transcript_id : NM_007836.1

name	E230016M11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255184 GeneID:320172 MGI:2443524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : RIKEN cDNA E230016M11 gene transcript_id : XM_989634.2

name	EG667310 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255211 GeneID:667310 MGI:3647296
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 177 ESTs, 14 Proteins product : predicted gene, EG667310 transcript_id : XM_989693.2

name	LOC634745 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255171 GeneID:634745
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477189.1

name	C130060K24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425292 CCDS:CCDS20206.1 GeneID:243407 MGI:2441881
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC243407 protein_id : NP_780733.1

name	9030611K07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665744 GeneID:414084 MGI:3041165
definition	codon_start : 1 note : TNFAIP3 interacting protein 3; TNFAIP3-interacting protein 3 product : RIKEN cDNA 9030611K07 protein_id : NP_001001495.2

name	A930038C07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369491 CCDS:CCDS20207.1 GeneID:68169 MGI:1915419
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC68169 protein_id : NP_765987.1

name	Prdm5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286828 CCDS:CCDS20208.1 GeneID:70779 MGI:1918029
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : PR domain containing 5 protein_id : NP_081823.2

name	LOC100041916 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255173 GeneID:100041916
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477256.1

name	Mad2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543218 CCDS:CCDS20210.1 GeneID:56150 MGI:1860374
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence IDA]; GO:0000776 - kinetochore [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005816 - spindle pole body [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0000070 - mitotic sister chromatid segregation [Evidence IMP]; GO:0007094 - mitotic spindle checkpoint [Evidence ISS] [Evidence IMP]; GO:0045841 - negative regulation of mitotic metaphase/anaphase transition [Evidence TAS] codon_start : 1 product : MAD2 (mitotic arrest deficient, homolog)-like 1 protein_id : NP_062372.2

name	V1rc15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717661 CCDS:CCDS20211.1 GeneID:171188 MGI:2159451
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C15 protein_id : NP_598931.1

name	LOC100041941 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255175 GeneID:100041941
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477288.1

name	V1rc14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717667 CCDS:CCDS20212.1 GeneID:171187 MGI:2159450
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C14 protein_id : NP_598930.1

name	LOC546901 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255178 GeneID:546901
definition	codon_start : 1 product : similar to vomeronasal receptor V1RC10 protein_id : XP_001477340.1

name	V1rc12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21699048 CCDS:CCDS20213.1 GeneID:171185 MGI:2159444
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C12 protein_id : NP_598928.1

name	V1rc11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21699040 CCDS:CCDS20214.1 GeneID:171184 MGI:2159443
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C11 protein_id : NP_598927.1

name	V1rc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21699044 CCDS:CCDS20215.1 GeneID:171183 MGI:2159442
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C10 protein_id : NP_598926.1

name	V1rc13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717657 CCDS:CCDS20216.1 GeneID:171186 MGI:2159445
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C13 protein_id : NP_598929.1

name	EG546903 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82901212 GeneID:546903 MGI:3644802
definition	codon_start : 1 product : similar to vomeronasal receptor V1RC13 protein_id : XP_621716.2

name	LOC100042008 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255181 GeneID:100042008
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477421.1

name	4930597O21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255183 GeneID:75373 MGI:1922623
definition	codon_start : 1 product : hypothetical protein LOC75373 protein_id : XP_994641.2

name	Gng12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384618 GeneID:14701 MGI:1336171
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005083 - small GTPase regulator activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : guanine nucleotide binding protein (G protein), gamma 12 protein_id : NP_079554.1

name	Gadd45a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681149 CCDS:CCDS20217.1 GeneID:13197 MGI:107799
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IEA]; GO:0007098 - centrosome cycle [Evidence IGI]; GO:0006469 - negative regulation of protein kinase activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 note : DNA-damage inducible transcript 1; Gadd45alpha; growth arrest and DNA-damage-inducible, alpha product : growth arrest and DNA-damage-inducible 45 alpha protein_id : NP_031862.1

name	E230016M11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377407 GeneID:320172 MGI:2443524
definition	codon_start : 1 product : hypothetical protein LOC320172 protein_id : XP_994728.1

name	EG667310 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377409 GeneID:667310 MGI:3647296
definition	codon_start : 1 product : hypothetical protein protein_id : XP_994787.1

name	LOC667160 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667160
definition	number : 1 pseudo : _no_value

name	LOC627751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627751
definition	number : 1 pseudo : _no_value

name	LOC546902 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546902
definition	number : 1 pseudo : _no_value

name	LOC667318 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667318
definition	number : 4 pseudo : _no_value

name	LOC667318 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667318
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:130666
definition	standard_name : D6Mit125

name	(CDS detail)
type	STS
link
xref	UniSTS:210373
definition	standard_name : RH136383

name	(CDS detail)
type	STS
link
xref	UniSTS:231622
definition	standard_name : RH142375

name	(CDS detail)
type	STS
link
xref	UniSTS:144847
definition	standard_name : Dnajc2

name	(CDS detail)
type	STS
link
xref	UniSTS:116609
definition	standard_name : D6Mit162

name	(CDS detail)
type	STS
link
xref	UniSTS:130707
definition	standard_name : D6Mit162.1

name	(CDS detail)
type	STS
link
xref	UniSTS:123473
definition	standard_name : 20.MMHAP44FLG2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:142615
definition	standard_name : D6Rck337

name	(CDS detail)
type	STS
link
xref	UniSTS:209952
definition	standard_name : RH135956

name	(CDS detail)
type	STS
link
xref	UniSTS:207971
definition	standard_name : BE335543

name	(CDS detail)
type	STS
link
xref	UniSTS:124157
definition	standard_name : 35.MMHAP81FLD5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:490600
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207970
definition	standard_name : BE634783

name	(CDS detail)
type	STS
link
xref	UniSTS:144963
definition	standard_name : AU048513

name	(CDS detail)
type	STS
link
xref	UniSTS:123582
definition	standard_name : 22.MMHAP97FRH7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130998
definition	standard_name : D6Mit95

name	(CDS detail)
type	STS
link
xref	UniSTS:123398
definition	standard_name : 18.MMHAP79FRF9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:225980
definition	standard_name : Mad2l1

name	(CDS detail)
type	STS
link
xref	UniSTS:144520
definition	standard_name : Stk5

name	(CDS detail)
type	STS
link
xref	UniSTS:78798
definition	standard_name : Z72355

name	(CDS detail)
type	STS
link
xref	UniSTS:495560
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:484924
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123657
definition	standard_name : 24.MMHAP6FLH3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:491560
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:494237
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:489275
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:491560
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:484923
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:495559
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:484923
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:492636
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:51726
definition	standard_name : Z72357

name	(CDS detail)
type	STS
link
xref	UniSTS:12197
definition	standard_name : Z72358

name	(CDS detail)
type	STS
link
xref	UniSTS:164326
definition	standard_name : AI842738

name	(CDS detail)
type	STS
link
xref	UniSTS:209881
definition	standard_name : RH135883

name	(CDS detail)
type	STS
link
xref	UniSTS:161322
definition	standard_name : RH124500

name	(CDS detail)
type	STS
link
xref	UniSTS:179385
definition	standard_name : AI314170

name	(CDS detail)
type	STS
link
xref	UniSTS:142839
definition	standard_name : Gadd45a

name	(CDS detail)
type	STS
link
xref	UniSTS:125638
definition	standard_name : U00937

name	(CDS detail)
type	STS
link
xref	UniSTS:210543
definition	standard_name : RH136562

name	(CDS detail)
type	STS
link
xref	UniSTS:38389
definition	standard_name : Z72359

name	(CDS detail)
type	STS
link
xref	UniSTS:207972
definition	standard_name : BB208751

name	(CDS detail)
type	STS
link
xref	UniSTS:259146
definition	standard_name : Sod1

name	EG667141 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94377403 GeneID:667141 MGI:3647865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : predicted gene, EG667141 pseudo : _no_value transcript_id : XR_001981.1

name	4930544G11Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255100 GeneID:67653 MGI:1914903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930544G11 gene pseudo : _no_value transcript_id : XR_035138.1

name	LOC627833 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255207 GeneID:627833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 ESTs, 4 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_033943.1

name	LOC100042816 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255208 GeneID:100042816
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 41 ESTs, 6 Proteins product : similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G pseudo : _no_value transcript_id : XR_033952.1

name	LOC100042837 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255210 GeneID:100042837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins product : similar to protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) pseudo : _no_value transcript_id : XR_033973.1

clone name	MSMg01-463G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-448B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507L22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387I02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-073M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-103I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033J20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-078D06.T7 (MSMg01no078_d06.b1)	MSMg01-078D06.TJ (MSMg01no078_d06.g1)
ACC	AG299594	AG299595
length	954	689
length of high quality (start - end)	---	397 (73 - 469)
definition	CHROMAT_FILE: MSMg01no078_d06.b1 PHD_FILE: MSMg01no078_d06.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:26:27 2005	CHROMAT_FILE: MSMg01no078_d06.g1 PHD_FILE: MSMg01no078_d06.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:26:27 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	AGAAAAAAGATAAAATAATAATNAAATATTACTCTTTTCTTTTTTTGATA TTTAGTACTTAAGAAGGAACAATACCAAGAGTNTAACAAATAACTACAGT CGATCTCCCCTCTTCTTATCATCATCGCCACGTACTACTAATATCTATAT ATTTATAGCCTAAAAAACCCACCCCGCCACACTTCCCCACATACCAAAAC CAGCACAGCTTCACCACCACTTCTGCAATAATAATAGCACTTTACTATTC CTTTCCGTTCTCGTTACATTCCGCACACCCGTTCCCTAATAAAAATAAAA TATTTTTGTGGTCCCGGGGGTCCCCGGGCCCCTTAAAAATAACGGAAAAC TTCAACCTTAATTACGAGACAAAAAAGGGGGAATCCCGCCGGGGCAAATT TCCTTCAAGTATTCCTNCCATGATAAAGCGCCCCTTTCCCCTTGGAGGCC AACAACATGGGGCCTTTTCCCTTCCTTTTGGCCCAAGGCCATTTTGGGGA AAAGGTCTGGGCCGGGCTTTTATCCTTGGGTTTTTTTACCCCTTTCTCCC CTGGGGTAAAAACCTTTTTTGGGTCCCCCCCCCCCCTTGGGAGAAATGGG TTCTCCCCCAATGGGGCCCCCCCACCCCCCGATTTTTTTTTGGTGTCTTG ATAAAAACACCCCTCAAGGGTGGGACTCAAAATTCCTCTGTTCTCCGGGC GAATTATTATCTCCCGGTAGAAAGAATATAATTCACATCCACACAATAGG TGTGTGCCCTCGATTCTCTCTCTTATCTCCAACAAATAACTTTACAGAGG AGGTGGGTGGCTGTCTCCCCCCACCCAACAAACACGCTCTTCCCACCCCA AGGGACGTTAATATGAAATAAATACACATCTCTCTTGCGAATAAAACACA CTCTCGGGAGAGAGAAGGCGGTGATAGCTCAAAAAACAAAAACAAAAATC AAAG	CATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXCAGGTAAAACCAGAGGTTGCCTTGGTGT GGTGTGCTGAAGAAAAAGGGTTGGTATGACTCTTTTTCTAGAAAGAGGAA AGGGAGTAAGTGCAGTGAGCATCCATAGCATGAAGATACTGACAGCCGGA CACTGCAGAAGAACAGAGGGAGCAATGAGAAAGTAAGCCAAACCAGACAG CTCCAGCTTCCCAGCTTCAAGCCAGCGGGGAGCATAAACCATGTTCAAAA GGTGAGGCAGGCAGCTCTAGTGTAGAGAACTGGCAGTCCTACCTACAGCA CAAGGCTAGAGTCTGAAACCTTGTGCGGTCCTGCTGAGGTTGATTCCTGC AGCAGGACAGGTCAGTAGTAGAGAAGAATTCCATCTTGTAACTCTACGGA TTTAGAAAGAAAGCATATTTCTCCAGCAGGGAAGTTAACACCAGGTTTTG TAAAGAACAAAGGTCCACCTATAAAGATCTCAGCGGTGTGTTTTCTTACC TCATTTTCCACATATTAAAAAGACGGGCTCTATCTAGCACCCTGCTCTGC TCATAACACCATTTCATACTCTCACTGCAAGTATTTTCCCCATCGGAATC GCTATACCCAGCAGTTATCCTTTCTTTATCTATGGACAC
quality values	Open. Hide. 6 6 6 8 10 13 13 10 6 6 6 6 8 8 11 8 8 8 8 8 8 3 0 3 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 10 10 9 9 8 8 8 8 8 8 10 8 8 7 7 8 10 10 10 10 10 8 8 8 8 8 8 9 10 9 9 9 9 9 9 8 6 6 6 8 3 0 3 10 10 11 8 10 8 8 8 8 8 8 8 6 6 7 8 8 8 8 8 6 6 8 6 11 11 10 9 9 9 9 8 8 8 8 8 8 11 11 11 11 10 10 10 6 6 6 6 7 8 8 8 8 8 8 9 9 10 9 9 9 11 11 9 10 10 10 8 8 8 14 10 13 10 10 11 11 11 11 11 18 13 10 10 10 10 10 10 11 8 10 6 6 8 8 9 9 10 10 10 11 11 12 10 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 10 10 11 8 12 11 11 11 11 8 8 10 10 11 8 8 8 10 10 8 6 6 6 8 8 8 8 8 8 8 9 9 9 9 9 8 10 8 8 8 8 8 8 10 10 10 10 9 9 9 8 8 8 8 8 8 8 8 6 6 6 10 8 8 8 8 9 9 10 15 10 9 8 9 8 12 8 9 9 12 17 13 13 8 6 6 8 7 9 11 8 8 8 8 8 17 8 6 6 10 10 11 10 8 8 8 8 7 7 6 8 8 9 8 8 8 8 8 6 7 6 8 8 8 8 12 16 16 16 14 17 17 18 11 10 9 8 8 8 8 8 8 8 8 9 9 9 12 19 11 11 8 8 8 10 6 6 6 6 6 6 6 6 6 6 6 7 15 9 11 9 9 9 8 8 8 8 6 6 6 6 6 7 21 29 10 10 11 15 12 7 9 9 10 9 10 10 9 19 11 10 12 13 10 8 8 8 8 7 7 7 9 3 0 3 8 8 8 8 9 9 10 9 10 11 11 8 8 10 11 12 10 9 8 8 8 8 8 10 9 10 10 8 8 8 8 8 8 8 8 8 11 8 9 9 11 14 12 14 16 16 17 16 15 15 10 11 11 11 21 16 22 18 20 28 22 17 16 14 13 8 8 8 8 9 16 18 13 15 15 12 15 13 7 7 7 6 6 7 18 14 11 11 11 11 11 11 8 7 7 8 8 8 11 11 11 8 6 6 6 6 6 8 9 7 7 9 9 9 9 18 23 18 13 11 10 17 20 15 12 8 8 8 8 8 8 8 10 11 11 8 9 9 10 10 10 10 14 16 10 10 8 8 8 10 8 6 6 6 6 10 10 9 11 16 30 19 14 14 16 17 15 10 8 8 8 8 8 8 8 9 11 10 8 8 8 8 8 8 10 10 8 8 9 9 9 8 11 8 8 8 8 10 11 16 11 10 10 10 10 8 10 10 15 11 12 7 10 7 9 12 15 25 17 16 15 12 8 8 6 6 6 6 10 10 9 6 6 8 8 8 8 8 8 8 8 8 8 8 11 9 6 8 6 6 8 6 8 9 13 12 9 10 9 10 10 6 8 6 6 6 10 6 6 8 6 6 8 8 10 15 14 14 15 10 8 8 8 10 10 10 11 11 11 15 12 10 11 12 8 8 8 7 6 6 10 11 8 10 6 7 6 8 8 8 8 8 8 8 8 8 15 12 11 8 8 6 8 6 8 8 8 6 6 6 6 6 6 6 8 8 8 8 8 10 6 6 6 6 8 10 8 11 11 10 10 8 8 8 8 8 8 10 10 10 10 10 8 8 8 8 8 8 8 8 7 7 8 8 8 10 10 8 8 8 8 6 6 10 7 7 6 10 6 6 6 8 8 8 8 8 8 8 8 8 8 10 10 8 8 6 8 6 9 12 12 16 13 8 8 6 6 6 6 8 8 9 9 9 6 6 6 6 6 6 6 10 6 6 6 6 8 6 6 8 8 8 10 10 10 10 9 9 11 7 7 8 13 10 12 12 9 9 8 6 10 7 6 10 6 9 9 10 9 9 8 8 8 7 12 15 10 10 10 11 8 8 8 8 8 8 10 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 10 9 12 9 9 9 9 9 9 9 10 13 10 6 6 6 8 8 10 10 10 10 12 11 16 10 11 11 9 10 9 9	Open. Hide. 8 15 15 6 6 8 8 15 9 22 19 17 15 8 9 15 25 25 41 22 27 24 22 22 29 31 21 21 11 6 6 7 7 7 6 6 6 8 8 10 11 17 9 11 22 21 9 9 11 18 21 32 33 33 26 22 10 10 8 8 8 9 11 11 10 10 10 10 15 15 21 19 17 24 24 35 36 48 48 48 48 42 37 37 40 42 37 43 37 37 42 48 48 43 42 29 29 36 36 41 41 41 42 47 46 42 48 48 42 42 42 43 43 43 43 48 47 33 32 32 32 33 33 41 41 41 41 48 48 57 57 57 57 57 68 57 57 38 32 22 22 28 33 42 43 44 44 50 50 57 44 44 43 37 37 41 41 47 41 46 46 46 41 41 41 47 50 50 57 54 54 52 57 52 50 50 47 41 41 47 50 50 50 41 36 37 42 35 46 57 57 57 52 52 57 52 52 52 52 52 52 52 52 57 44 43 43 31 31 38 43 50 57 52 52 52 57 57 57 57 57 50 43 37 37 43 50 43 43 47 57 57 57 50 48 48 57 57 48 48 48 57 59 59 57 57 57 57 57 57 59 57 46 43 43 44 57 57 68 57 57 57 57 57 57 57 57 44 43 43 44 46 48 48 47 47 43 43 37 37 43 39 46 43 40 33 25 25 24 36 36 42 48 42 48 43 43 43 43 39 34 32 32 26 31 28 35 35 37 39 43 36 36 28 28 21 24 19 20 13 15 10 10 10 13 25 30 39 41 41 37 33 28 28 28 28 32 32 32 32 48 57 47 44 43 39 39 39 42 43 48 43 43 43 43 43 43 43 36 36 36 43 44 46 47 43 43 43 43 44 57 48 47 41 44 19 17 11 19 24 44 34 44 43 42 42 28 35 35 42 42 42 42 43 57 57 57 47 36 32 28 28 20 24 20 22 32 32 32 37 32 32 28 23 18 18 11 11 11 12 12 18 28 32 28 25 25 36 40 42 42 30 30 30 37 41 32 19 16 12 10 10 10 19 21 32 32 32 32 37 28 23 15 11 11 12 21 24 34 34 30 25 24 23 28 22 28 23 30 19 20 13 18 11 11 11 16 13 16 18 20 31 22 14 17 18 18 20 19 27 20 20 27 28 30 34 30 24 23 20 18 18 21 24 23 19 15 12 12 13 15 16 16 24 15 16 15 23 14 13 15 19 21 22 30 35 35 35 33 28 21 16 13 8 8 8 8 8 8 10 11 10 14 16 16 15 10 13 10 6 6 6 13 13 20 17 17 10 10 8 8 8 10 13 15 16 12 18 13 13 9 10 15 8 8 8 10 15 15 9 9 9 10 23 15 8 7 6 10 8 10 12 19 15 12 12 15 13 8 8 8 10 11 11 10 10 10 10 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 9 9 10 12 9 11 10 12 8 8 6 6 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 10 8 9 8 8 8 8 12 12 15 8 8 8 8 8 10 10 6 6 8 8 8 8 8 8 8 8 8 8 11 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no078_d06.g1 MSMg01no078_d06.g1 CHROMAT_FILE:
MSMg01no078_d06.g1 PHD_FILE: MSMg01no078_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:27 2005
         (397 letters)



>mm_chr6_66208456_66209252
          Length = 797

 Score =  760 bits (393), Expect = 0.0
 Identities = 396/397 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggtaaaaccagaggttgccttggtgtggtgtgctgaagaaaaagggttggtatgactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtaaaaccagaggttgccttggtgtggtgtgctgaagaaaaagggttggtatgactc 260

                                                                       
Query: 61  tttttctagaaagaggaaagggagtaagtgcagtgagcatccatagcatgaagatactga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttctagaaagaggaaagggagtaagtgcagtgagcatccatagcatgaagatactga 320

                                                                       
Query: 121 cagccggacactgcagaagaacagagggagcaatgagaaagtaagccaaaccagacagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagccggacactgcagaagaacagagggagcaatgagaaagtaagccaaaccagacagct 380

                                                                       
Query: 181 ccagcttcccagcttcaagccagcggggagcataaaccatgttcaaaaggtgaggcaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagcttcccagcttcaagccagcggggagcataaaccatgttcaaaaggtgaggcaggc 440

                                                                       
Query: 241 agctctagtgtagagaactggcagtcctacctacagcacaaggctagagtctgaaacctt 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctctagtgcagagaactggcagtcctacctacagcacaaggctagagtctgaaacctt 500

                                                                       
Query: 301 gtgcggtcctgctgaggttgattcctgcagcaggacaggtcagtagtagagaagaattcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgcggtcctgctgaggttgattcctgcagcaggacaggtcagtagtagagaagaattcc 560

                                                
Query: 361 atcttgtaactctacggatttagaaagaaagcatatt 397
           |||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcttgtaactctacggatttagaaagaaagcatatt 597


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space:   305744
Effective search space used:   305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information