Query= MSMg01no078_g06.b1 MSMg01no078_g06.b1 CHROMAT_FILE:
MSMg01no078_g06.b1 PHD_FILE: MSMg01no078_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:42 2005
(278 letters)
>mm_chr6_134987520_134988197
Length = 678
Score = 503 bits (260), Expect = e-147
Identities = 271/278 (97%), Gaps = 7/278 (2%)
Strand = Plus / Minus
Query: 4 ggaattcatgttgt----atccaaagagaaaggcaggcaggcatggtagtcagagcttgt 59
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggaattcatgttgtagaaa---aaagagaaaggcaggcaggcatggtagtcagagcttgt 534
Query: 60 aatcctagcactggagaggtagagacaagtgggccctatttggagagttctagacctgtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aatcctagcactggagaggtagagacaagtgggccctatttggagagttctagacctgtt 474
Query: 120 ctatcatttcaagatacaagatggacagcatcagaggaatgacagccggggacagcctct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ctatcatttcaagatacaagatggacagcatcagaggaatgacagccggggacagcctct 414
Query: 180 gcctccgtgggcatgtgcgcacacatgtgcacacacatgtgcacgtgtgtacccatgcat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gcctccgtgggcatgtgcgcacacatgtgcacacacatgtgcacgtgtgtacccatgcat 354
Query: 240 accatgcacaggcacacagagagaagagaagaaaaaga 277
||||||||||||||||||||||||||||||||||||||
Sbjct: 353 accatgcacaggcacacagagagaagagaagaaaaaga 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no078_g06.g1 MSMg01no078_g06.g1 CHROMAT_FILE:
MSMg01no078_g06.g1 PHD_FILE: MSMg01no078_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:42 2005
(313 letters)
>mm_chr6_134812542_134813255
Length = 714
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 1 cttcca-accaagtcaaattgtctgtttaaccctgcacatgcgcacccactcaggggaaa 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttccacaccaagtcaaattgtctgtttaaccctgcacatgcgcacccactcaggggaaa 260
Query: 60 gcgtgtattgccatggagacatctgcatgtcctctgaacctaattatgaaagcagccgag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgtgtattgccatggagacatctgcatgtcctctgaacctaattatgaaagcagccgag 320
Query: 120 gggcaggcaggagctcggtctgtacagagctcaccgagcgtgcaccaagtccaagcaaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggcaggcaggagctcggtctgtacagagctcaccgagcgtgcaccaagtccaagcaaca 380
Query: 180 gatggggttgctgccagcaatgaaaaaaatctagtgtggtcacgcgtgcctgtaatccca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatggggttgctgccagcaatgaaaaaaatctagtgtggtcacgcgtgcctgtaatccca 440
Query: 240 ggactggggacgtacaggcaggaggatcggggagttcagagccagcccaggatacatgac 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggactggggacgtacaggcaggaggatcggggagttcagagccagcccaggatacatgag 500
Query: 300 aagctgacttacaa 313
||||||||||||||
Sbjct: 501 aagctgacttacaa 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 714
Length adjustment: 9
Effective length of query: 304
Effective length of database: 705
Effective search space: 214320
Effective search space used: 214320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
