Query= MSMg01no079_n02.b1 MSMg01no079_n02.b1 CHROMAT_FILE:
MSMg01no079_n02.b1 PHD_FILE: MSMg01no079_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:33 2005
(649 letters)
>mm_chr6_35221652_35222700
Length = 1049
Score = 1243 bits (643), Expect = 0.0
Identities = 643/643 (100%)
Strand = Plus / Minus
Query: 7 gaattctgaaggcctctctggtcaccacttgtctgtgagcttgccatgatgtagtgagag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gaattctgaaggcctctctggtcaccacttgtctgtgagcttgccatgatgtagtgagag 790
Query: 67 ttcccggaagtccatgagctctcgatgacttcagcaaagggagcttgcggccccaccatg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ttcccggaagtccatgagctctcgatgacttcagcaaagggagcttgcggccccaccatg 730
Query: 127 cagtggtctttaagtttgacgaactgtaaagtgctgacgaactgtgaaacgccctacctt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cagtggtctttaagtttgacgaactgtaaagtgctgacgaactgtgaaacgccctacctt 670
Query: 187 gctttccacacactctccatttctttattgcctttgcagtctctaggatactctatgaag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gctttccacacactctccatttctttattgcctttgcagtctctaggatactctatgaag 610
Query: 247 agtccgagcatgtcagtcacagagaagagaaagatgaaaagtgcatatgtgacttaggat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agtccgagcatgtcagtcacagagaagagaaagatgaaaagtgcatatgtgacttaggat 550
Query: 307 gtatttgtacagaaattcaatgccatgggagaggcattaaattaagttaggagaggaggg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtatttgtacagaaattcaatgccatgggagaggcattaaattaagttaggagaggaggg 490
Query: 367 ctaaccctcaccactgtgccagggctgcagagcatggggttgtcagattgggagggggat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctaaccctcaccactgtgccagggctgcagagcatggggttgtcagattgggagggggat 430
Query: 427 gagagtcacactcaagtacaaagtgcagggtaaagccctccggtgccaccctaggaagat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gagagtcacactcaagtacaaagtgcagggtaaagccctccggtgccaccctaggaagat 370
Query: 487 catgtggccaaggcgggtggctctaatgtcccatgagcaggaaacccaaagatagaatgt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 catgtggccaaggcgggtggctctaatgtcccatgagcaggaaacccaaagatagaatgt 310
Query: 547 tgtacaatcttgagacatttctgcgctacaaaactgatctaatcataaattcaacatggc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgtacaatcttgagacatttctgcgctacaaaactgatctaatcataaattcaacatggc 250
Query: 607 tctggtcgagtcagacagggcagctgaggcctggtaccccacc 649
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tctggtcgagtcagacagggcagctgaggcctggtaccccacc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_n02.g1 MSMg01no079_n02.g1 CHROMAT_FILE:
MSMg01no079_n02.g1 PHD_FILE: MSMg01no079_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:33 2005
(618 letters)
>mm_chr6_35150946_35151963
Length = 1018
Score = 1172 bits (606), Expect = 0.0
Identities = 615/618 (99%), Gaps = 1/618 (0%)
Strand = Plus / Plus
Query: 1 caagttgatcctagaatgaaatgaactgctcaggttgacatttgtctggaatatagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagttgatcctagaatgaaatgaactgctcaggttgacatttgtctggaatatagaact 260
Query: 61 ggattttctaggatttttctaattatgtttgatgttgttatgctgtaaaaatactaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggattttctaggatttttctaattatgtttgatgttgttatgctgtaaaaatactaaact 320
Query: 121 taactataatgtcttattgaaataaaataacgtaatccttgataaaatatttctgtaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taactataatgtcttattgaaataaaataacgtaatccttgataaaatatttctgtaaag 380
Query: 181 tgattttttaaagaagttttttttttttttttaaagatttaaaaaataaaatgtgtgaat 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tgattttttaaagaagttttttttttttttt-aaagatttaaaaaataaaatgtgtgaat 439
Query: 241 acactgttgctgtcttcagacacaccagaagagggcatcagatctcattacagatggttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 440 acactgttgctgtcttcagacacaccagaagagggcatcagatctcattacagattgttg 499
Query: 301 tgagccaccatgtggttgctgggaattgaactcaggacttctgaaagagcagtcagtgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgagccaccatgtggttgctgggaattgaactcaggacttctgaaagagcagtcagtgct 559
Query: 361 cttaactgctaagctatctccccaactccttaaaacattatttgttgactcattcatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttaactgctaagctatctccccaactccttaaaacattatttgttgactcattcatgaa 619
Query: 421 ttagatatattttagtgtaatagtactatgctgttctagaaaggacttaacagtggcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttagatatattttagtgtaatagtactatgctgttctagaaaggacttaacagtggcttt 679
Query: 481 gatttttgtcactctagtaggtcatttatctgtttgtagtatttatgttcctgggtttgt 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 680 gatttttgtcactctagtaggtcatttctctgtttgtagtatttatgttcctgggtttgt 739
Query: 541 gaaagaatttaacttccattctttccatgaccaaactagtgatctaccagctaaaagaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaaagaatttaacttccattctttccatgaccaaactagtgatctaccagctaaaagaca 799
Query: 601 gataccttctttgttgtg 618
||||||||||||||||||
Sbjct: 800 gataccttctttgttgtg 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
