Query= MSMg01no080_c07.b1 MSMg01no080_c07.b1 CHROMAT_FILE:
MSMg01no080_c07.b1 PHD_FILE: MSMg01no080_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:57 2005
(594 letters)
>mm_chr6_101788094_101789086
Length = 993
Score = 1036 bits (536), Expect = 0.0
Identities = 575/588 (97%), Gaps = 1/588 (0%)
Strand = Plus / Plus
Query: 7 gaattccaagtaacaccaatgccagtgcccagtgcatgggaaataataacagttttggga 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 207 gaattccaagtaacaccaatgccagtgcccagtgcatgggaaataataacagttttgtga 266
Query: 67 ggactgtagacttctttcaatttttataatatgctaggcactgggctgcaagttttatgc 126
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggactgtggacttctttcaatttttataatatgctaggcactgggctgcaagttttatgc 326
Query: 127 atacaatctcaattgatttgggaaaagaaaagaaataccgcttcccagaagtgcattcct 186
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 327 atacaatctcaattgatttgggaaaagaaaagaaataccgcttcccagaaatgcattcct 386
Query: 187 ttacaaaggggtgttgtgtaagaaagcctttagaaaaaatattcattaaccccctgaggg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 387 ttacaaaggggtgttgtgtaagaaagcctttagaaaaaatattcattaacccc-tgaggg 445
Query: 247 actttggactgtataaagtatgtgtctagtttatgttctctcacatattaaaggagagga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 actttggactgtataaagtatgtgtctagtttatgttctctcacatattaaaggagagga 505
Query: 307 ttaggctgaataaaattatatgtaattacatgaagacctgtatagaagagcagaaagcag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttaggctgaataaaattatatgtaattacatgaagacctgtatagaagagcagaaagcag 565
Query: 367 caggacaagatccttctccctcagtcttctcagtctcaaactacatgcttgatagtttga 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 566 caggacaagatccttctccctcagtcttctcagtctcaaactacatgcttgatagttcga 625
Query: 427 cttgagtttgttaattgttttccttatctattggcgctgtagtggtagtcattttttctc 486
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 626 ctttagtttgttaattgttttccttatctattggagctgtagtggtagtcattttttctc 685
Query: 487 ttcatttctgtcacatttttatcctatagtccaagatagtatatgtcttgtgtatcctct 546
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||
Sbjct: 686 ttcatttctgtcacatttttaccctataatccaagatagtatatgtcttgtgtatcatct 745
Query: 547 aaaggcactgaaagacccacaacatgaggactcccccacattctgact 594
||||| ||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 746 aaaggtactgaaagacccacaacgtgaggactccccaacattctgact 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 993
Length adjustment: 10
Effective length of query: 584
Effective length of database: 983
Effective search space: 574072
Effective search space used: 574072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_c07.g1 MSMg01no080_c07.g1 CHROMAT_FILE:
MSMg01no080_c07.g1 PHD_FILE: MSMg01no080_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:57 2005
(255 letters)
>mm_chr6_101881271_101881925
Length = 655
Score = 420 bits (217), Expect = e-122
Identities = 220/221 (99%)
Strand = Plus / Minus
Query: 34 accaatatcatacagataccaagggacgactgaaatcataactatgaataaataaatata 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 accaatatcatacagataccaagggacgactgaaatcataactatgaataaataaatata 390
Query: 94 aagaagaatgacaaagaaaaagcatgaataataataagatgaagataagtctctgagatg 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aagaagaatgacaaagaaaaagcatgaataataataagatgaagataagtctctgagatg 330
Query: 154 agttgatctactcaagaatctttcatatcaatctagattcaactaccagacctgcaagta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agttgatctactcaagaatctttcatatcaatctagattcaactaccagacctgcaagta 270
Query: 214 ctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 254
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 229
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
