XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTATTTAC
ATTCCATAACAATGGTAGTTTCATCAACAGTTTGTTTCTGTCAATTATAG
GTGGTGGACTGGAAATAACCATAGTAGGTGCTAACAAAATCAACAAAGAG
ATGATACATAGTGAGAACGACACAGTGGTCACCCTCTCTTACCAAAGTAG
TATCACCTTCTAGTGGGGCAAGGAGAATAACATTTTTTTAAAAAATGGAG
AAAACTCATTATGAGATTGCTTATTAATTAAAGTACAGCCTAAGGGCTTA
TGACTGAATACTAATGGTTTGAGCAGAACAGGTTGAGGAGTCTAGCGGAC
CCTAGATGACATTACAGACTGTATATAACCAGATGCATGTTGGAGAGCTA
TCCTCACAAACTCCGAATTAGAGACAAGAGAGTGCTCTAGAGTCAATGAG
GGGAGCACAGTCAGTGAGTTAAGACCCTTTACTGGTCATGTTCCCCTATG
AACAGAGGGGTACCTTCCACAGAGCAGTACTAAGTCTCATTTTCCTCTGC
TGAAGATTTTTTCCAGGAGCCTCCATCAGGTCCTCCTTCCTGTGTGAAGA
GAACTTTAAAGACACCTTCCCCCATACAGATATCAATACTTTTGCAATCC
TATCCCTTTTCCCCTGTACCTGCCTGAAGTATGGGATAACTGGGGAGCAA
ATGGGGAATATGCTTGTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAAAAGATGAAAGGTCCAAATGGTACGGGTAAAGGAA
AGTAACTATAATACTAATTTTCTAAAGACAGTCTGTGAGAGACCTTTGAG
CCCAAGAGGGAACAATTTTGCTGAGTATGTTGGGGCAAACGTACTGTCTG
CCTTTTTATTTCTCTAACACATATTTTCTCACATGCTTTCATCAATATAT
GTTTGCTTTCCTTAACTGTCACTATTAATCCTGTAATAAATACATTACAA
AAACTTTTCTCCTACTGCTAATTGTAAGCATTCCATCTTGTGGAATGTGC
ACTCAGAAAATGCTATCCAAAATAGCCTTGTTATTTTCTGTGCAGCAGTT
TAATCATTGTGATCTCATGTGAGCTCATCTCCACTGAGATGTAGTTCCTG
ACAAAAATGTTCACTTTAGTGTGTTTGTTAAAACTCAAGGTGAATAAATT
ACTGTAATACTCCAATCATAAGCCAGGGAAAACAATATTTTCAGAAATTC
TGCTTGCTGTGCAGAAGGCTCCATCCTTTTTCTATTTGAAAGCATACTGT
GCTATTACAGGTGTTCAAATGCCAACATAAAATGCAGTTCAATGTTTCCT
AGACAACAGTATACATTTTGAGAAAACAGGGCTTTTTGTTTGTTTGCTTT
CTTTTTGCAAGTCCTATATCN

Query= MSMg01no082_l17.b1 MSMg01no082_l17.b1 CHROMAT_FILE:
MSMg01no082_l17.b1 PHD_FILE: MSMg01no082_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:16 2005
         (519 letters)



>mm_chr6_102059520_102060438
          Length = 919

 Score =  969 bits (501), Expect = 0.0
 Identities = 513/517 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggaattctatttacattccataacaatggtagtttcatcaacagtttgtttctgtcaatt 62
           |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 203 ggaattctatttacatactataacaatggtagtttcatcaacaatttgtttctgtcaatt 262

                                                                       
Query: 63  ataggtggtggactggaaataaccatagtaggtgctaacaaaatcaacaaagagatgata 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ataggtggtggactggaaataaccatagtaggtgctaacaaaatcaacaaagagatgata 322

                                                                       
Query: 123 catagtgagaacgacacagtggtcaccctctcttaccaaagtagtatcaccttctagtgg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catagtgagaacgacacagtggtcaccctctcttaccaaagtagtatcaccttctagtgg 382

                                                                       
Query: 183 ggcaaggagaataacatttttttaaaaaatggagaaaactcattatgagattgcttatta 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggcaaggagaataacatttttttaaaaaatggagaaaactcattatgagattgcttatta 442

                                                                       
Query: 243 attaaagtacagcctaagggcttatgactgaatactaatggtttgagcagaacaggttga 302
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 443 attaaagtacagcctaagggcttatgactgaatactaaaggtttgagcagaacaggttga 502

                                                                       
Query: 303 ggagtctagcggaccctagatgacattacagactgtatataaccagatgcatgttggaga 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggagtctagcggaccctagatgacattacagactgtatataaccagatgcatgttggaga 562

                                                                       
Query: 363 gctatcctcacaaactccgaattagagacaagagagtgctctagagtcaatgaggggagc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gctatcctcacaaactccgaattagagacaagagagtgctctagagtcaatgaggggagc 622

                                                                       
Query: 423 acagtcagtgagttaagaccctttactggtcatgttcccctatgaacagaggggtacctt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 acagtcagtgagttaagaccctttactggtcatgttcccctatgaacagaggggtacctt 682

                                                
Query: 483 ccacagagcagtactaagtctcattttcctctgctga 519
           |||||||||||||||||||||||||||||||||||||
Sbjct: 683 ccacagagcagtactaagtctcattttcctctgctga 719


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no082_l17.g1 MSMg01no082_l17.g1 CHROMAT_FILE:
MSMg01no082_l17.g1 PHD_FILE: MSMg01no082_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:16 2005
         (561 letters)



>mm_chr6_102199171_102200131
          Length = 961

 Score = 1062 bits (549), Expect = 0.0
 Identities = 558/561 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaagatgaaaggtccaaatggtacgggtaaaggaaagtaactataatactaattttcta 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aaaagatgaaaggcccaaatggtacgggtaaaggaaagtaactataatactaattttcta 702

                                                                       
Query: 61  aagacagtctgtgagagacctttgagcccaagagggaacaattttgctgagtatgttggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aagacagtctgtgagagacctttgagcccaagagggaacaattttgctgagtatgttggg 642

                                                                       
Query: 121 gcaaacgtactgtctgcctttttatttctctaacacatattttctcacatgctttcatca 180
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 641 gcaaacgtactgtctgcctttttatttctctaaaacatattttctcacatgctttcatca 582

                                                                       
Query: 181 atatatgtttgctttccttaactgtcactattaatcctgtaataaatacattacaaaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 atatatgtttgctttccttaactgtcactattaatcctgtaataaatacattacaaaaac 522

                                                                       
Query: 241 ttttctcctactgctaattgtaagcattccatcttgtggaatgtgcactcagaaaatgct 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttttctcctacagctaattgtaagcattccatcttgtggaatgtgcactcagaaaatgct 462

                                                                       
Query: 301 atccaaaatagccttgttattttctgtgcagcagtttaatcattgtgatctcatgtgagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atccaaaatagccttgttattttctgtgcagcagtttaatcattgtgatctcatgtgagc 402

                                                                       
Query: 361 tcatctccactgagatgtagttcctgacaaaaatgttcactttagtgtgtttgttaaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcatctccactgagatgtagttcctgacaaaaatgttcactttagtgtgtttgttaaaac 342

                                                                       
Query: 421 tcaaggtgaataaattactgtaatactccaatcataagccagggaaaacaatattttcag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tcaaggtgaataaattactgtaatactccaatcataagccagggaaaacaatattttcag 282

                                                                       
Query: 481 aaattctgcttgctgtgcagaaggctccatcctttttctatttgaaagcatactgtgcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aaattctgcttgctgtgcagaaggctccatcctttttctatttgaaagcatactgtgcta 222

                                
Query: 541 ttacaggtgttcaaatgccaa 561
           |||||||||||||||||||||
Sbjct: 221 ttacaggtgttcaaatgccaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space:   524001
Effective search space used:   524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)