Query= MSMg01no088_l13.b1 MSMg01no088_l13.b1 CHROMAT_FILE:
MSMg01no088_l13.b1 PHD_FILE: MSMg01no088_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:18 2005
(435 letters)
>mm_chr6_110464950_110465784
Length = 835
Score = 797 bits (412), Expect = 0.0
Identities = 430/436 (98%), Gaps = 2/436 (0%)
Strand = Plus / Minus
Query: 1 acaagctcttcctttcctcactaatgtgtctttcctgtgtatctgacttttccccaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 acaagctcttcctttcctcactaatgtgtctttcctgtgtatctgacttttccccaactt 576
Query: 61 ccttcatatgaaaagcttggctttagatttgtgtcctgtatgctctggtattgactcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ccttcatatgaaaagcttggctttagatttgtgtcctgtatgctctggtattgactcatt 516
Query: 121 taatcatgatttaacatgatggctgctcaaatctatttgcaaataaactcaccttcaaaa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 515 taatcatgatttaacatgatggctgctcaaatctatttgcaaataagctcaccttcaaaa 456
Query: 181 gc-atggaagattgggcttaaagggacttcaatgagtgcaaaacctaacccatattatat 239
|| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 455 gcaat-gaagattgggcttaaagggacttcaatgagtgcaaaacctaacccacattatat 397
Query: 240 ttaccatgtttaatgctttctgcccctatttctttgtttatactgaaagagtaaactgtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttaccatgtttaatgctttctgcccctatttctttgtttatactgaaagagtaaactgtg 337
Query: 300 attttctgtgtgaactcagagtgctgccacaattctttccattttgaataactttttcct 359
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 attttgtgtgtgaactcagagtgctgccacaattctttccattttgaataactttttcct 277
Query: 360 agatttatcatatcaatccagcaatacttagcttttaatttgtaatatgatctgtaatat 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aggtttatcatatcaatccagcaatacttagcttttaatttgtaatatgatctgtaatat 217
Query: 420 ttttatttctgaaaag 435
||||||||||||||||
Sbjct: 216 ttttatttctgaaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_l13.g1 MSMg01no088_l13.g1 CHROMAT_FILE:
MSMg01no088_l13.g1 PHD_FILE: MSMg01no088_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:18 2005
(239 letters)
>mm_chr6_110386409_110387047
Length = 639
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%)
Strand = Plus / Plus
Query: 1 aacttatggcatttataaatgaagtaagagttatgaactatagattacaaacaatattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aacttatggcatttataaatgaagtaagagttatgaactatagattacaaaaaatattac 260
Query: 61 atgttaataaaaccattgtttcccataaaagtgtctgcaggttttagctaagtgaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttaataaaaccattgtttcccataaaagtgtctgcaggttttagctaagtgaattat 320
Query: 121 taatatcttcatagcaggctgttatgtcttatgtgggaaatgacagctggttcccctttg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatatcttcatagcaggttgttatgtcttatgtgggaaatgacagctggttcccctttg 380
Query: 181 atgagcacatctccttctgagaattatgaggtctgttttaaaagctccccatgtttgac 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgagcacatctccttctgagaattatgaggtctgttttaaaagctccccatgtttgac 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
