TCTTTCCTTTTTTCTCCCCCCCCCCCCTTTTTTCCCCCTTTTTCCTTTTT
TTTTTCCTTTTTTTTCTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCGCGGAATTCCTATCACCTTTCTAGCATTTAGGATTCTGT
CAGTATTTCCACAGAATACTGCCACATACAGTACTGATATGATGCAAAAT
CCAGAAATGCGTTGTATCCAAGCATGTACTGTACACAAATACCATAAACC
TAAAGGTAGGTGGTATCGATTTTGCCATATCTGAAGTTTTGCAGGATATT
TGCTTGCTTCTTTTCATATCATTAATCATGGATTTGTAGTTTGATAACTT
GTCCTATTCCCATATAGACTTTACAATATTTCCCAGTGCTAGTTTTAGTA
CTAGCTTCTTTGCATCCTTGTTTCTCTCAACTCTACAGGGCTGTTTTCAC
TTATAACCTGTCAATAACGCTTTTCCACATCATCCATCATCTTGCCCTTT
GGCACACTCCTTTTCTGATTTATCTCTATATTTTTTCAATGTTTACTCCC
CCGACCGTTTTCATTTTCTCCTCTTCTCCCATTTATGCTTGTACCTTCTC
CGTTTTTTTGTCACGTTCTTTCTCCTTCCTACTTTTCCCTTTTCCCTTTC
TCCCCCTTTTATTTCCCCCCTTCCTTCCCTTTTTTTTTCCCTCTTTTTTT
TCCCCTTTTTTCCCCTTTTTTTCCCCTTTTTTCCCCTTCCCTTTTCCCCC
TTTTTCCTTCGCCGCATTTCTAATATTATTTCCCCCCCCCTTTTCCCTCT
TCCGTATTTTTTTTCCCCCCCCCCCCTCTTTG

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTGAAACAAAGGAGCTTAAGAAAACTCT
GCTCCATTTCCTGAGAGGCAAGTGGCTGTTTCTATCTTTTTCATTTGTAC
TTTCTCTAGAAACATGCATACAAGAACTGTGTAGCAAGAAAGAGACCAGA
ACAAATATGAAGCAGTAAAAATAAACATAATTAATTAATTAATACTGAAT
TAATTACAGGCTTTGTGAGACTGGGGAAAACTACAGACTAGACACTTGAT
AAAAAATGGTGTGGTTGTTGCTCAGCCTTAGCTGGATGGCAGAGGTGGAA
AAGCAATAGTGAGACCTCTCTCTTTCTCTTTCTTTCTTCTTTTTTCTTTC
CTTTCTTCTTTCCTTTCTCATGAGTCTGTATGTGCAATTGCACATGTAAA
TGTTTATATTTATGTATGCATGCATGCATGCACCATCCCCATGGTGTTTG
TGTATGTGTGTGTGTATGTATGTGCNTTNATTTTTTTTATAATAAATCTT
TACTTTCCCCCCCACCCATCTCTTCCCCACTTCCTCTCAACTATTCACTA
TATTCTCACTTTCTCATATTAACTTTTCCTTCTTTCCTCCCCCTTTTTCA
CCTTTTTCCCCCCCCCCCCTTCCTTTCTTTTTACCCTCTCCTTTTCAACC

Query= MSMg01no089_k15.g1 MSMg01no089_k15.g1 CHROMAT_FILE:
MSMg01no089_k15.g1 PHD_FILE: MSMg01no089_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:32 2005
         (441 letters)



>mm_chr6_106799059_106799899
          Length = 841

 Score =  818 bits (423), Expect = 0.0
 Identities = 435/441 (98%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgaaacaaaggagcttaagaaaactctgctccatttcctgagaggcaagtggctgtttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaaacaaaggagcttaagaaaactctgctccatttcctgagaggcaagtggctgtttc 260

                                                                       
Query: 61  tatctttttcatttgtactttctctagaaacatgcatacaagaactgtgtagcaagaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tatctttttcatttgtactttctctagaaacatgcatacaagaactgcgtagcaagaaag 320

                                                                       
Query: 121 agaccagaacaaatatgaagcagtaaaaataaacataattaattaattaatactgaatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaccagaacaaatatgaagcagtaaaaataaacataattaattaattaatactgaatta 380

                                                                       
Query: 181 attacaggctttgtgagactggggaaaactacagactagacacttgataaaaaatggtgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attacaggctttgtgagactggggaaaactacagactagacacttgataaaaaatggtgt 440

                                                                       
Query: 241 ggttgttgctcagccttagctggatggcagaggtggaaaagcaatagtgagacctctctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttgttgctcagccttagctggatggcagaggtggaaaagcaatagtgagacctctctc 500

                                                                       
Query: 301 tttctctttctttcttcttttttctttcctttcttctttcctttctcatgagtctgtatg 360
           |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 t----ctttctttcttcttttttctttcctttcttctttcctttctcatgagtctgtatg 556

                                                                       
Query: 361 tgcaattgcacatgtaaatgtttatatttatgtatgcatgcatgcatgcaccatccccat 420
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgcaattgcacgtgtaaatgtttatatttatgtatgcatgcatgcatgcaccatccccat 616

                                
Query: 421 ggtgtttgtgtatgtgtgtgt 441
           |||||||||||||||||||||
Sbjct: 617 ggtgtttgtgtatgtgtgtgt 637


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)