Query= MSMg01no092_b18.b1 MSMg01no092_b18.b1 CHROMAT_FILE:
MSMg01no092_b18.b1 PHD_FILE: MSMg01no092_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:51 2005
(561 letters)
>mm_chr6_27126031_27126991
Length = 961
Score = 1065 bits (551), Expect = 0.0
Identities = 557/559 (99%)
Strand = Plus / Minus
Query: 3 cgtttgcctccaaaggcatctatcttctttccagttatgtaaaagacaatgttcagaaga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 cgtttgcctccaaaggcatctatcttctttccagttatgtaaaagacaatgttcagaaga 702
Query: 63 gatttagatatctattatgaatcatgcttggaatcaactttaggaccaataaagtaagat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gatttagatatctattatgaatcatgcttggaatcaactttaggaccaataaagtaagat 642
Query: 123 tctgaaggtgaaaagtttgtccacattaagcacttgtaggacttgatgacaaaaacacaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tctgaaggtgaaaagtttgtccacattaagcacttgtaggacttgatgacaaaaacacaa 582
Query: 183 acaatttccaattactttggaatatttgctataaaactttatttaaaaaagaattgacca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 acaatttccaattactttggaatatttgctataaaactttatttaaaaaagaattgacca 522
Query: 243 tagtttccctttaaagtaggtcttttcctgcctgtttgtaaatgcagagctctttgcata 302
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 521 tagtttccctttaaagtaggtcttttcctgcctgtttgtaaatgtagagctctttgcata 462
Query: 303 acacggaatgtaccatgattaaattctactttaaccaaaatcttgagagagaagtagaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 acacggaatgtaccatgattaaattctactttaaccaaaatcttgagagagaagtagaaa 402
Query: 363 aattgttactatggagacaacacacactctggactcgccctgttgagattagtaaattct 422
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 401 aattgttactatggagacaacacacactctggactcgccttgttgagattagtaaattct 342
Query: 423 gtgttctccatcgcccatttcccatgccatccatctcttatcatggggaggatgtcagcc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtgttctccatcgcccatttcccatgccatccatctcttatcatggggaggatgtcagcc 282
Query: 483 cgtgtcagagctcttgtcatctattaagagctcagtgtctgctttgcttgcttgattctc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cgtgtcagagctcttgtcatctattaagagctcagtgtctgctttgcttgcttgattctc 222
Query: 543 ttatctgcttatttctggt 561
|||||||||||||||||||
Sbjct: 221 ttatctgcttatttctggt 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_b18.g1 MSMg01no092_b18.g1 CHROMAT_FILE:
MSMg01no092_b18.g1 PHD_FILE: MSMg01no092_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:51 2005
(340 letters)
>mm_chr6_26982329_26983068
Length = 740
Score = 598 bits (309), Expect = e-175
Identities = 332/341 (97%), Gaps = 4/341 (1%)
Strand = Plus / Plus
Query: 1 acttatttgatatgttgcgatttataaataagtatttgttatccacctggaccaagaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 acttatttgatatgttgcgatttataaataagtatttgttatccacatggaccaagaaaa 260
Query: 61 accattttatgaatgattcatctttgccaatcatgggtaatgatttactttctttctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accattttatgaatgattcatctttgccaatcatgggtaatgatttactttctttctttt 320
Query: 121 tcaccttgagtattgctaattcaggagcgaataaaacactacatatagaaatccaggtct 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 tcaccttgagtattgctaattcaggagcgaataaaacactacatacagaaatccaggtct 380
Query: 181 ttagtccctccattgatgatagcaatgtcaatatatttcatagaaatttttaaaatattt 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 ttagtccctccattgatgatagcaatgtcaatatatttcatagacatttttaaaatattt 440
Query: 241 ttt-attacatattttcctcaattacatttccaatgctatccgaaaagtcccccatacct 299
||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 ttttattacatattttcctcaattacatttccaatgctatctgaaaagtcccccatacc- 499
Query: 300 ccccccccacctttcctacacacccattcccatttttttgg 340
||||||||||||||||| |||||||||||||||||||||
Sbjct: 500 --ccccccacctttcctacccacccattcccatttttttgg 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
