CTACCATATTCCAAAGGATCCGCGGAATTATATAATTGACCACACATTTC
TTTTTATTGGCTGAACTGTCTTGCTGTATTATATGAATTCAAAATCGCCT
ACACACCACAGAATACAATGTTGAACTCCAACCAAATGTATATGTGTGTG
TGTGATGTAGCNNNNNCNNCNNCCCCCAATCCATTCATCATAAATTTCCT
TCCACACCCCCCCCCCCTCTCTTACCAACCCCCCCCCTCCTACCCCCCAC
TCTATAACATCCTTACCTACCCCCTTAAACCCCCAAAACCCCAACAAAAA
ACCCAAACTTTTTAAAAACACACATCCAAAACCAAACCCTAAACAAATCA
TTTCTTTTCCCCCCCCCCCCCCCCCCCCATACATTACCCACTTACTATTT
CTCATATCCCCCCCCCCACAAAAAAAAAAAAAAAAAACACCCCCTCCTCC
CTATTCACCCCCCCCAACAAACCACTAACACCAACCAATATAAAAAACCC
ATCATATCCCACTAACCACATCCAACACTACCTCCTTCACCCCAAACACA
CCATAATAACACAATACCCTCCCCCCCCATATCCCACCCCAATATCAACC
ACATCCTCACAAACAACCCTACAACTAATATTAACAATATTACCCATACC
CTAAACAATAACACCATCAAACAAAACTAACACCCATACACATAACAAAT
TCCCCTCACCATCTCTTACCTCCAACCCAACCCCG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACTTTTTAAATTAATGAAGGACTTATAA
TCATGAGACAACCTACTCACTACGGATATGGGTGATCACAACCATGTGAT
TGGGGCGTGTGAATGTATTAAGGGTGAATAACACTGGCCAGTCTATAAAG
TCATTCTAAAGTACTAACACTTTCCCCTTTCAGCAGTAGGCAAGAAGAAC
GTTTTAAAAGGCAGATAGATTCTCCTTAAAGGGTGACAGTGTATCTTTCA
GTAGATGAACCATGTATAGCATCATTTGAGGGTGTAATAACACTAAACAT
TTTACTCTAGAACTTTTAAGAGTCCCAATTACTACCTGATGTAGAAACAA
TTTTGTTGAATTTAAACAGCCCAAACTTCAGTGAGGTAGATAAATATTTT
TCAACTACTGTTCTAATGAAATGTCACTACTATTATTTTAGGAAGCATAT
TAAATTAGAATTTAATTTAAATAGAAAGTGAGTTGCTTTCTTTTGAAGAA
TTACGCTATTGCCTGTGTTAAGCAAATAATAATTAACACGAGTACATACA
GTTATAATTAGAAGGGAATTTAATTAAACAAATATGCCAACATAACCAGA
TGCATGACAAAGTAATTGTAATATGCCTTGCCAATGTATTCTTTCCCA

Query= MSMg01no094_p18.g1 MSMg01no094_p18.g1 CHROMAT_FILE:
MSMg01no094_p18.g1 PHD_FILE: MSMg01no094_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:51 2005
         (510 letters)



>mm_chr6_33655609_33656519
          Length = 911

 Score =  949 bits (491), Expect = 0.0
 Identities = 506/511 (99%), Gaps = 1/511 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttttt-aaattaatgaaggacttataatcatgagacaacctactcactacggatatgg 59
           ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 711 actttttaaaattaatgaaggacttataatcatgagacaacctacacactaaggatatgg 652

                                                                       
Query: 60  gtgatcacaaccatgtgattggggcgtgtgaatgtattaagggtgaataacactggccag 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtgatcacaaccatgtgattggggcgtgtgaatgtattaagggtgaataacactggccag 592

                                                                       
Query: 120 tctataaagtcattctaaagtactaacactttcccctttcagcagtaggcaagaagaacg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tctataaagtcattctaaagtactaacactttcccctttcagcagtaggcaagaagaacg 532

                                                                       
Query: 180 ttttaaaaggcagatagattctccttaaagggtgacagtgtatctttcagtagatgaacc 239
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 531 ttttaaaaggcagatagattctccttaaagggtaacagtgtatctttcagtagatgaacc 472

                                                                       
Query: 240 atgtatagcatcatttgagggtgtaataacactaaacattttactctagaacttttaaga 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atgtatagcatcatttgagggtgtaataacactaaacattttactctagaacttttaaga 412

                                                                       
Query: 300 gtcccaattactacctgatgtagaaacaattttgttgaatttaaacagcccaaacttcag 359
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 411 gtcccaattactacctgatgtagaaacaattttgttgaatttaaacagtccaaacttcag 352

                                                                       
Query: 360 tgaggtagataaatatttttcaactactgttctaatgaaatgtcactactattattttag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgaggtagataaatatttttcaactactgttctaatgaaatgtcactactattattttag 292

                                                                       
Query: 420 gaagcatattaaattagaatttaatttaaatagaaagtgagttgctttcttttgaagaat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gaagcatattaaattagaatttaatttaaatagaaagtgagttgctttcttttgaagaat 232

                                          
Query: 480 tacgctattgcctgtgttaagcaaataataa 510
           |||||||||||||||||||||||||||||||
Sbjct: 231 tacgctattgcctgtgttaagcaaataataa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space:   450500
Effective search space used:   450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)