CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTAAGATAACACCAAGATATTGCCTAACAAAGGCTCAAGCATAGTTAT
ACAAATGGAGACATAGATACACACAATGACAGGACACTGCGCAATGCATC
CATCATCTTTCCACAATTTATTCGGATAAAAATCAAAATGAGTTTTTATT
CTTAGATAACCTCCTGCTTAAGTAGATTCATAGTAGCACATCTTCTGGCT
GATAATTGAGACCTAACTTCAGGTAAGATAAACAAAGAAATGAGGCTGGG
TTTTTTTTTTCAATATTTTTATCTCCTATCAACAGTGACAGTGAGTGGAC
AAAGCATTTGCTAGGATTGTTGACCTTCTTGTGTGTCTCTCGCCTTATCT
ACAAAGCAAGGTTAATGATGTCTGACTGAGAAAAGGATTTAGTGAATGAA
TGTAGCATTCTGGGAACACAGAAGGTTAGCACAATAGCACTTGAACTTTT
GTGTTGTTTGTTTGTTTTTGGTTTGTTTTTGGTTTGGGTTTGGGTGTTTT
ACAATTATTCATTCAAAATTCCTCTTTTGTAACCTTTTACAAAATTTACC
CCGCACTTCTCCTGTATTTGTTTGCTCAGCCATAGAGTTCCTCTGCCTAC
CTATTCGCCCTGTTCTTTCCCTCCCCCTTAATAATTTTCCCCCGCTTTTT
CTTCTCCCCTCCCTTTTTCACCCG

GGAGGCGCCTGGTTTCGTXXXXXXXXXXXXXXXXXXXXXXXXXCCGACAT
ACTTTCTTTCTTTCTTTTCTTTGTTTTTTTTTTTGTTTGTTTGTTTTTTG
AGACAGGATTTTTCTGTATAGCCCTGGCTGCTCTGGAACTTACTCCGTTG
ACCAGGCTGGCTCCATTCTCTTAACTTCCCCCGTTTCTGCCTCCCAATCG
TTACTATTTACCGGCGCGCCACACTACCGCCCATAATAAATTATCAATTC
TTAAAAATCAACCTACCATAAATTTATGTATCCTTTATTTTCCCATTTTT
TTCTCTTCAACCCTAACATAAATTAATACCACACACACATTATTCTCTTT
TTTATGAAACCCACCCTAACAGCCACCTATACCTCCCCCCCCCCCCTGCG
ATTCGCCTCTTCCGCAAAATCACCCAACATAACACTACGACCACCCAATT
CCCATATCATAACTCGTAACAACTTACCCATCAATTAGACACCTCAGTCT
TACCTGGTACTCCTCCCGCGCTAACCCGTCGATGCATTATGCATCAACGA
CCCAAGTTAACCTTCTGCATTTCCTTTCCTTCCTTCACCTTTCCCGGTCG
CCACCCTCTCTAAACCCCCCCGGTTTTTAATGTTTGACATCCCCCCACAT
CGCCCCGTCAATGTCGATAGCGTACATCCTACGTGCGTGATTAAGTTTAC
AAACTGCCTGACCCGCGCAAAAGACCCTTCCCCTAAATATG

Query= MSMg01no097_m22.b1 MSMg01no097_m22.b1 CHROMAT_FILE:
MSMg01no097_m22.b1 PHD_FILE: MSMg01no097_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:40 2005
         (503 letters)



>mm_chr6_9078756_9079666
          Length = 911

 Score =  891 bits (461), Expect = 0.0
 Identities = 493/507 (97%), Gaps = 8/507 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctaaga-taacaccaagatattgcctaacaaaggctcaagcatagttatacaa 63
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaattctctaagacaaacaccaagatattgcctaacaaaggctcaagcatagttatacaa 652

                                                                       
Query: 64  atggagacatagatacacacaatgacaggacactgcgcaatgcatccatcatctttccac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 atggagacatagatacacacaatgacaggacactgcgcaatgcatccatcatctttccac 592

                                                                       
Query: 124 aatttattcggataaaaatcaaaatgagtttttattcttagataacctcctgcttaagta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aatttattcggataaaaatcaaaatgagtttttattcttagataacctcctgcttaagta 532

                                                                       
Query: 184 gattcatagtagcacatcttctggctgataattgagacctaacttcaggtaagataaaca 243
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 531 gattcatagtagcacatcttctggctgataattgaaacctaacttcaggtaagataaaca 472

                                                                       
Query: 244 aagaaatgaggctgggtttttttttt----caatatttttatctcctatcaacagtgaca 299
           ||||||||||||||| ||||||||||    ||||||||||||||||||||||||||||||
Sbjct: 471 aagaaatgaggctggtttttttttttttttcaatatttttatctcctatcaacagtgaca 412

                                                                       
Query: 300 gtgagtggacaaagcatttgctaggattgttgaccttcttgtgtgtctctcgccttatct 359
           || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtaagtggacaaagcatttgccaggattgttgaccttcttgtgtgtctctcgccttatct 352

                                                                       
Query: 360 acaaagcaaggttaatgatgtctgactgagaaaaggatttagtgaatgaatgtagcattc 419
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 acaaagcaaagttaatgatgtctgactgagaaaaggatttagtgaatgaatgtagcattc 292

                                                                       
Query: 420 tgggaacacagaaggttagcacaatagcacttgaacttttgtgttgtt---tgtttgttt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||
Sbjct: 291 tgggaacacagaaggttagcacaatagcacttgaacttttgtgttgttgtttgtttgttt 232

                                      
Query: 477 ttggtttgtttttggtttgggtttggg 503
           |||||||||||||||||||||||||||
Sbjct: 231 ttggtttgtttttggtttgggtttggg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 911
Length adjustment: 10
Effective length of query: 493
Effective length of database: 901
Effective search space:   444193
Effective search space used:   444193
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)